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Wyszukujesz frazę "Genes" wg kryterium: Temat


Tytuł:
The relationship between biofilm formation, genes of virulence and iron metabolism in Escherichia coli
Autorzy:
Handrová, Lívia
Čuvalová, Anna
Kmeť, Vladimír
Powiązania:
https://bibliotekanauki.pl/articles/2183556.pdf
Data publikacji:
2018-12-31
Wydawca:
Uniwersytet Pedagogiczny im. Komisji Edukacji Narodowej w Krakowie
Tematy:
biofilm
virulence genes
iron metabolisms genes
Opis:
Escherichia coli is known as one of the bacterial species with the widest adaptability to variety of niches either within organisms or outside in environment. Most strains of E. coli are of low virulence and associated with opportunistic infections, whereas others are highly virulent. The success of E. coli in colonising such a wide range of hosts and environments is basically due to a noticeable ductility in exploiting the available resources. It is becoming increasingly clear that biofilms have an enormous impact on medicine because since 65% of animal and human bacterial infections involve biofilms. In present study, we isolated strains of E. coli from animals. 19 interesting isolates were selected and tested by PCR amplification to virulence - iutA, cvaC, iss, tsh, papC, kps, iha and iron metabolism genes - sitA, feoB, irp2, fyuA, iroN, ireA. The ability of biofilm formation was assessed in a quantitative assay using a microtiter-plate test. Bacterial strains were grown on BHI. We divided isolates of E. coli into four classes: very weak (63.0%), weak (10.5%), moderate (10.5%) and strong (16.0%) biofilm producers. Representation genes of virulence were highly in isolates from very weak biofilm producers - from 7 genes were 6 highly; only papC (P fimbrial adhesin) was low. Genes of iron metabolism were different. Genes - sitA, fyuA, ireA in strong isolates producing biofilm and feoB, irp2, iroN in weak producers were most represented. The results show possible relation between presence virulence factor and low biofilm formation.
Źródło:
Annales Universitatis Paedagogicae Cracoviensis Studia Naturae; 2018, 3 (suppl.); 24-32
2543-8832
2545-0999
Pojawia się w:
Annales Universitatis Paedagogicae Cracoviensis Studia Naturae
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Aging and longevity genes.
Autorzy:
Jazwinski, S
Powiązania:
https://bibliotekanauki.pl/articles/1044350.pdf
Data publikacji:
2000
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
aging
longevity genes
Opis:
The genetics of aging has made substantial strides in the past decade. This progress has been confined primarily to model organisms, such as filamentous fungi, yeast, nematodes, fruit flies, and mice, in which some thirty-five genes that determine life span have been cloned. These genes encode a wide array of cellular functions, indicating that there must be multiple mechanisms of aging. Nevertheless, some generalizations are already beginning to emerge. It is now clear that there are at least four broad physiological processes that play a role in aging: metabolic control, resistance to stress, gene dysregulation, and genetic stability. The first two of these at least are common themes that connect aging in yeast, nematodes, and fruit flies, and this convergence extends to caloric restriction, which postpones senescence and increases life span in rodents. Many of the human homologs of the longevity genes found in model organisms have been identified. This will lead to their use as candidate human longevity genes in population genetic studies. The urgency for such studies is great: The population is graying, and this research holds the promise of improvement in the quality of the later years of life.
Źródło:
Acta Biochimica Polonica; 2000, 47, 2; 269-279
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Genetic Variation as a Possible Explanation for the Heterogeneity of Pain in Tendinopathy: What can we learn from other pain syndromes?
Autorzy:
Mkumbuzi, Nonhlanhla S.
Posthumus, Michael
September, Alison V.
Collins, Malcolm
Powiązania:
https://bibliotekanauki.pl/articles/1942934.pdf
Data publikacji:
2021
Wydawca:
Uniwersytet Szczeciński. Wydawnictwo Naukowe Uniwersytetu Szczecińskiego
Tematy:
tendon pain
genetics
extracellular matrix genes
inflammation genes
COMT
Opis:
The mechanisms of pain in tendinopathy are unclear. Current theories implicate tendon structural changes, neovascularisation, inflammation or changes in central pain processing. As with other types of musculoskeletal pain, tendon pain has high interindividual variability and, as with other types of pain, this could be attributed to genetic variation. Notably, the association between certain genetic polymorphisms and susceptibility to tendinopathy is well established in the literature. Therefore, the investigation of the mechanisms of tendon pain should also extend to include genetic variation as a possible explanation for the clinical features of tendon pain. This review summarises the current knowledge on genetic contributors to chronic pain and highlights findings that are relevant to chronic tendon pain. In particular, based on the current hypotheses on the possible sources of tendon pain, it focuses on findings that relate to genes that encode structural connective tissue components, inflammatory markers, ion channels and catecholamines and how they may relate to chronic tendon pain. In the absence of a definitive mechanism of tendon pain, an a priori genetic approach that is guided by these current hypotheses may help elucidate the mechanisms of tendon pain which may allow a more rational approach to research and treatment.
Źródło:
Central European Journal of Sport Sciences and Medicine; 2021, 36; 57-72
2300-9705
2353-2807
Pojawia się w:
Central European Journal of Sport Sciences and Medicine
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Immune response gene polymorphisms in tuberculosis
Autorzy:
Fol, Marek
Druszczynska, Magdalena
Wlodarczyk, Marcin
Ograczyk, Elzbieta
Rudnicka, Wieslawa
Powiązania:
https://bibliotekanauki.pl/articles/1038871.pdf
Data publikacji:
2015
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
tuberculosis
susceptibility/resistance genes
Opis:
Tuberculosis (TB), an infectious disease caused by Mycobacterium tuberculosis (M.tb), remains a leading public health problem in most parts of the world. Despite the discovery of the bacilli over 100 years ago, there are still many unanswered questions about the host resistance to TB. Although one third of the world's population is infected with virulent M.tb, no more than 5-10% develop active disease within their lifetime. A lot of studies suggest that host genetic factors determine the outcome of M.tb-host interactions, however, specific genes and polymorphisms that govern the development of TB are not completely understood. Strong evidence exists for genes encoding pattern recognition receptors (TLR, CD14), C-type lectins, cytokines/chemokines and their receptors (IFN-γ, TNF-α, IL-12, IL-10, MCP-1, MMP-1), major histocompatibility complex (MHC) molecules, vitamin D receptor (VDR), and proton-coupled divalent metal ion transporters (SLC11A1). Polymorphisms in these genes have a diverse influence on the susceptibility to or protection against TB among particular families, ethnicities and races. In this paper, we review recent discoveries in genetic studies and correlate these findings with their influence on TB susceptibility.
Źródło:
Acta Biochimica Polonica; 2015, 62, 4; 633-640
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
A review of studies about the genes encoding the collagen proteins in the context of the anterior cruciate ligament rupture
Autorzy:
Szumiło, Piotr
Powiązania:
https://bibliotekanauki.pl/articles/1055131.pdf
Data publikacji:
2014
Wydawca:
Uniwersytet Szczeciński. Wydawnictwo Naukowe Uniwersytetu Szczecińskiego
Tematy:
ACL rupture
collagen genes
polymorphisms
Opis:
ACL rupture is a common injury in professional sport as well as recreation. It happens most often during deceleration, lateral pivoting, or landing tasks. Most often it is a non-contact mechanism during which the knee is exposed to large forces. The main component of the ACL, reaching 75% of the content, is collagen. Ligaments are made of several types of collagen, which perform different functions. It has been proved that various variants of collagen genes and their interaction with other genes may significantly influence the risk of injury to the ACL. This publication contains a review of studies about polymorphisms of collagen genes in the context of ACL rupture.
Źródło:
Central European Journal of Sport Sciences and Medicine; 2014, 5, 1; 91-97
2300-9705
2353-2807
Pojawia się w:
Central European Journal of Sport Sciences and Medicine
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Seeking genetic determinants of selected metabolic disorders in women aged 45–60
Autorzy:
Szkup, M.
Brodowski, J.
Jurczak, A.
Stanisławska, M.
Grochans, E.
Powiązania:
https://bibliotekanauki.pl/articles/2085996.pdf
Data publikacji:
2020
Wydawca:
Instytut Medycyny Wsi
Tematy:
Genes
Metabolic Syndrome X
PPAR gamma
Opis:
Introduction and objective. The biochemical and anthropometric consequences of metabolic disorders exert an enormous effect on the functioning of people worldwide. The aim of this study is to assess relationships between biochemical and anthropometric parameters associated with metabolic syndrome, and the presence of the PPAR-γ rs1801282, the FTO rs9939609, and the MC4R rs17782313 polymorphisms in women aged 45–60. Materials and method. The study included 425 women, aged 45–59 years, from the general population of the West Pomeranian Province in north-west Poland. The research procedure involved a structured interview, anthropometric and blood pressure measurements, biochemical analysis of serum, and genetic analysis. Results. The carriers of the A/A genotype of the FTO polymorphism had higher LDL levels than their counterparts with the T/T genotype (p=0.01). The carriers of the T/T genotype of the MC4R polymorphism had lower non-HDL levels than those with the C/C and C/T genotypes (p=0.019). Weight was related to the C/C and the C/G + G/G genotypes of the PPAR-γ gene polymorphism (p=0.046). The model of inheritance for the MC4R polymorphism had a significant effect on TG (p=0.039) and non-HDL (p=0.05) levels. Conclusions. The genotypes analyzed in the study had only a slight direct effect on the biochemical and anthropometric abnormalities typical of metabolic disorders. Nonetheless, the risk alleles (A allele of the FTO rs9939609 and the C allele of the MC4R rs17782313) were found to be related to lipid metabolism disorders in 45–60-year-old women.
Źródło:
Annals of Agricultural and Environmental Medicine; 2020, 27, 3; 407-412
1232-1966
Pojawia się w:
Annals of Agricultural and Environmental Medicine
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
The effect of Artichoke (Cynara scolymus L.) on the expression of calcium-binding proteins in the eggshell gland of laying hens
Autorzy:
Abadjieva, D.
Ankova, D.
Grigorova, S.
Kistanova, E.
Powiązania:
https://bibliotekanauki.pl/articles/2087239.pdf
Data publikacji:
2021
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
hens
egg shell gland
genes
artichoke
Źródło:
Polish Journal of Veterinary Sciences; 2021, 24, 1; 127-133
1505-1773
Pojawia się w:
Polish Journal of Veterinary Sciences
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Antibiotic resistance of bacteria and incidence of carbapenamase-coding genes blaPER and blaGES in isolates from wastewater treatment plants
Autorzy:
Jendrzejewska, Natalia
Powiązania:
https://bibliotekanauki.pl/articles/1178215.pdf
Data publikacji:
2018
Wydawca:
Przedsiębiorstwo Wydawnictw Naukowych Darwin / Scientific Publishing House DARWIN
Tematy:
antibiotics-resistant bacteria
genes
pollution
wastewater
Opis:
The increase in number of antibiotic resistant bacteria poses a serious environmental and health problem. The development of microbial resistance is intensified by the widespread use of antibiotics in medicine, veterinary, farming and aquaculture. The wastewater treatment plants receiving the wastewater from hospitals, slaughterhouses, farms, pharmaceutical industry and houses can be potential places of spreading of antibiotic resistant genes. The molecular mechanisms of the bacterial resistance, including the horizontal transfer of antibiotic resistant genes and the presence of mobile genetic elements can be responsible for the increase in antibiotic resistance during wastewater treatment. The aim of this study was to analyze the phenomenon of bacterial resistance to selected β-lactam antibiotics (ESBL) by detecting the genes that determine this resistance. The PCR method was used to analyze the occurrence of two genes: blaPER and blaGES in wastewater samples. It was revealed that the resistant/total bacteria ratio was significantly higher in the effluent compared with the influent wastewater. Genes blaPER and blaGES were isolated from several strains predominating in both aeration tank (5% and 20% respectively) and effluent wastewater (15% and 12% respectively).
Źródło:
World Scientific News; 2018, 93; 30-39
2392-2192
Pojawia się w:
World Scientific News
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Analyses of the genes involved in disease development to construct disease-resistant plants by genetic engineering
Autorzy:
Tsuyumu, S.
Hirata, H.
Powiązania:
https://bibliotekanauki.pl/articles/385202.pdf
Data publikacji:
2009
Wydawca:
Sieć Badawcza Łukasiewicz - Przemysłowy Instytut Automatyki i Pomiarów
Tematy:
genes
analyses
disease-resistant
genetic engineering
Opis:
Many genes responsible for the disease development were identified from transposon-tagging, micro-array, and proteomics analyses. Here, we introduce especially the genes required for the initiation of pathogenic life cycle, the suppression of otherwise induction of resistance responses, massive production of virulence factors in plant pathogenic bacteria and an unique plant gene responsible for the development of canker symptom. From these findings we came to raise some new strategies to construct disease-resistant plants by genetic engineering.
Źródło:
Journal of Automation Mobile Robotics and Intelligent Systems; 2009, 3, 4; 84-86
1897-8649
2080-2145
Pojawia się w:
Journal of Automation Mobile Robotics and Intelligent Systems
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Molekularne poskramianie lęków, czyli o płci konstruowanej genetycznie
Molecular Repressing of Fears That Is about Sex Which Is Genetically Constructed
Autorzy:
Derra, Aleksandra
Powiązania:
https://bibliotekanauki.pl/articles/636706.pdf
Data publikacji:
2013
Wydawca:
Uniwersytet Jagielloński. Wydawnictwo Uniwersytetu Jagiellońskiego
Tematy:
gene
genetics
gender
history of genes
sex genes (SRY
DAX1)
feminist approach to science
Opis:
The author considers the way contemporary genetics employs the notion of the gene. She studies its history and contemporary senses, being especially interested in how genetics defines sex. She presents the history of seeking for genetically defined masculinity pointing out how it has established oversimplified model of the phenomenon of biological sex. She underlines the role of feminist critiques in developing less narrow-minded views of sex in biology. The author shows that biology and especially genetics has promised to resolve doubts concerning human nature and the nature of sexes. Making this kind of promises can be interpreted as a special way of dealing with human fears which have appeared together with development of contemporary science and modern technologies and its impact on the world. It concerns especially fears of the interventions in natural environment and applications of the results of the research in genetics to medicine, both of which change the society and its values. When genetics has promised to find causal correlations between given genes and organisms’ properties, it was supposed to explain the source of diseases or even human personalities or specific social relations. Unequivocal explanations were needed to calm us down, to reduce fears, to allow us to state that this is how we are „by nature” made. As it turned out genetics was not able to fulfilled these promises for as the author is going to show, its objects of studies are more complex and complicated than the genetics have assumed.
Źródło:
Przegląd Kulturoznawczy; 2013, 1(15); 85-99
1895-975X
2084-3860
Pojawia się w:
Przegląd Kulturoznawczy
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Hepatic expression of miR-122 and antioxidant genes in patients with chronic hepatitis B
Autorzy:
Wójcik, Kamila
Piekarska, Anna
Szymańska, Bożena
Jabłonowska, Elżbieta
Powiązania:
https://bibliotekanauki.pl/articles/1038774.pdf
Data publikacji:
2016
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
hepatitis B
antioxidant genes
miR-122
Opis:
Introduction: The pathogenesis of chronic hepatitis B depends on both, the immune response and oxidative stress. Aim of the study: To assess the hepatic expression of miR-122 and the antioxidant genes: HMOX-1, NQO1 and GFER1, in liver biopsy specimens obtained from patients with chronic hepatitis B, with regard to selected clinical and histological parameters, using RT-PCR. Results: The study group comprised 34 HBV-infected patients. Statistically significant associations were found between lower hepatic expression of HMOX-1 and greater severity of liver inflammation (p=0.04). However, significantly higher expression of NQO1 was observed in patients with advanced liver fibrosis (p=0.035). Hepatic expression of miR-122 in HBV patients was not associated with viral load or liver injury. Conclusion: The hepatic expression of HMOX-1and NQO1 may be associated with liver injuries in chronic hepatitis B. However, hepatic expression of miR-122 does not seem to correspond to progression of the liver disease.
Źródło:
Acta Biochimica Polonica; 2016, 63, 3; 527-531
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Association and polymorphism study of seven candidate genes with reproductive traits in three pig breeds in Hungary
Autorzy:
Hunyadi-Bagi, Ágnes
Balogh, Péter
Nagy, Krisztina
Kusza, Szilvia
Powiązania:
https://bibliotekanauki.pl/articles/1038827.pdf
Data publikacji:
2016
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
reproduction traits
pig
polymorphism
genes
Hungary
Opis:
Seven genes (BF, EGF, ESR, FSHB, H2AFZ, LEP and PRLP) were studied as candidate gene influencing eleven reproduction traits (interval between litters (IBL), percent of litter (PL), number of litters (NL), number of piglets born dead (NBD), number of piglet born alive (NBA), total number born (TNB), mean of born alive (MBA), mean of born dead (MBD), mean of born total (MBT), mean of piglets at 21 days of age (M21D) and growth rate (GR) in three pig breeds (Hungarian Large White (HLW), Duroc and Pietrain) by PCR-RFLP. Based on the observed vs. expected genotypes frequencies populations across loci were in Hardy-Weinberg equilibrium (P>0.05). In case HLW breed ESR and FSHβ genes were in disequilibrium. Association study suggested that only EGF gene showed significant influence on the trait NBA and TNB. The AA genotype are preferable for sows, associated with higher NBA and TNB. The longest IBL, and the highest NL is associated with AB and AA genotype of EGF gene. IBL is significantly shorter in case of pigs with AB and AA alleles than BB alleles of PRLP genes. Selection for these SNPs could improve the reproductivity in the studied breeds.
Źródło:
Acta Biochimica Polonica; 2016, 63, 2; 359-364
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Anti-inflammatory effect on genes expression after four days of Qigong training in peripheral mononuclear blood cells in healthy women
Autorzy:
Półrola, P.
Wilk-Frańczuk, M.
Wilczyński, J.
Nowak-Starz, G.
Góral-Półrola, J.
Chrusciński, G.
Bonisławska, I.
Pedrycz, A.
Żychowska, M.
Powiązania:
https://bibliotekanauki.pl/articles/2081731.pdf
Data publikacji:
2018
Wydawca:
Instytut Medycyny Wsi
Tematy:
qigong
genes expression
heat shock protein
inflammation
Opis:
Introduction. Some studies have shown the influence of Qigong on gene expression in different cells, but there is little data associated with the influence of this kind of therapy on genes expression in pheripheral monocellucar blood cells. Objective. The aim of this study was to evaluate changes in the expression of genes associated with cellular stress response in peripheral mononuclear blood cells (PMBC) in healthy women. Materials and method. The experiment took place at the Japanese Martial Arts Centre “DOJO” in Stara Wieś, Poland, conducted over the course of a 4-day qigong training session. To evaluate the genes effect of this training, blood samples were taken before and after the training period. This experiment involved 20 healthy women (aged 56.2±9.01, body height 164.8±6.5 and mass 65.5±8.2). To determine the expression of HSF-1, HSPA1A, NF-kB, IL10 and CCL2 mRNA, 3 ml of venous blood was collected. The blood samples were placed in tubes allowing for separation (BD Vacutainer CPTTM) before and after the 4 days of qigong training. Isolated PMBC were used to determine gene expression using real-time qRT-PCR (quantitative reverse transcription polymerase chain reaction). Results. Significant decreases in NF-kB and CCL2 mRNA and increases in IL10, HSF1 and HSPA1A m-RNA were detected after 4 days of qigong training. The obtained findings suggest that qigong caused a reduction in the inflammatory and intensified anti-inflammatory gene expression, as well as a higher expression of HSF-1 and HSPA1A. Conclusion. The adaptive response to qigong training was similar to the adaptive response to physical activity and was detected through gene expression in PMBC. Furthermore, this kind of training is especially indicated for women because of their higher susceptibility to psychosocial stress when compared to men.
Źródło:
Annals of Agricultural and Environmental Medicine; 2018, 25, 2; 329-333
1232-1966
Pojawia się w:
Annals of Agricultural and Environmental Medicine
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Polyphenols and flavonoids in the prevention and treatment of diabetes type 2
Autorzy:
Wałkuski, M.
Szwed, O.
Lendzioszek, M.
Terlikowska, K.M.
Powiązania:
https://bibliotekanauki.pl/articles/1918750.pdf
Data publikacji:
2018
Wydawca:
Uniwersytet Medyczny w Białymstoku
Tematy:
Diabetes
diet
food
polyphenols
flavonoids
genes
alleles
Opis:
The genetic basis of diabetes is associated with genes that predispose to obesity development. There are also variants of genes that change the metabolism and distribution of glucose in the body tissues. Others regulate the lipid profile or affect insulin resistance, directly or indirectly affecting the risk of developing diabetes. Polyphenols are a group of compounds that have a protective effect on pancreatic cells. Thanks to their antioxidant activity, they protect cells against apoptosis, improve glucose metabolism and reduce hyperglycemia. The aim of the review was to discuss the mechanisms of bioactive food compounds influence on the human genome and to demonstrate their relationship between diabetes prevention and treatment.
Źródło:
Progress in Health Sciences; 2018, 8(2); 174-180
2083-1617
Pojawia się w:
Progress in Health Sciences
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Isolation, molecular cloning and characterisation of two genes coding chitin deacetylase from mucor circinelloides ibt-83
Autorzy:
Kaczmarek, Michał
Struszczyk-Świta, Katarzyna
Florczak, Tomasz
Szczęsna-Antczak, Mirosława
Antczak, Tadeusz
Powiązania:
https://bibliotekanauki.pl/articles/1034731.pdf
Data publikacji:
2016
Wydawca:
Sieć Badawcza Łukasiewicz - Polskie Towarzystwo Chitynowe
Tematy:
chitin deacetylase
genes
molecular cloning
sequences analysis
Opis:
Chitosan is a linear N-deacetylated derivative of chitin, soluble in acetic solutions. The deacetylation of chitin can be achieved enzymatically using chitin deacetylase (ChDa) (EC 3.5.1.41), which hydrolyses the N-acetamido groups of N-acetyl-D-glucosamine residues in chitin and chitosan. Complementary DNA (cDNA), which encodes ChDa, was isolated from M. rouxii s well as other fungi. Chitin deacetylase activity was detected in partially purified and concentrated crude extract of the protein from Mucor circinelloides IBT-83. Additionally, two open reading frames (ORF), putatively encoding ChDa, were identified and amplified from cDNA of this strain. Each ORF was molecularly cloned and sequenced. Amino acid sequences of ChDaI and ChDaII were predicted, using nucleotide sequences of these cDNA clones, and analysed by means of bioinformatics tools.
Źródło:
Progress on Chemistry and Application of Chitin and its Derivatives; 2016, 21; 93-103
1896-5644
Pojawia się w:
Progress on Chemistry and Application of Chitin and its Derivatives
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
A search for the in trans role of GraL, an Escherichia coli small RNA
Autorzy:
Dylewski, Maciej
Ćwiklińska, Monika
Potrykus, Katarzyna
Powiązania:
https://bibliotekanauki.pl/articles/1038537.pdf
Data publikacji:
2018
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
GraL
GreA
sRNA
sRNA targets
synthetic lethal genes
Opis:
Small RNA are very important post-transcriptional regulators in both, bacteria and eukaryotes. One of such sRNA is GraL, encoded in the greA leader region and conserved among enteric bacteria. Here, we conducted a bioinformatics search for GraL's targets in trans and validated our findings in vivo by constructing fusions of probable targets with lacZ and measuring their activity when GraL was overexpressed. Only one target's activity (nudE) decreased under those conditions and was thus selected for further analysis. In the absence of GraL and greA, the nudE::lacZ fusion's β-galactosidase activity was increased. However, a similar effect was also visible in the strain deleted only for greA. Furthermore, overproduction of GreA alone increased the nudE::lacZ fusion's activity as well. This suggests existence of complex regulatory loop-like interactions between GreA, GraL and nudE mRNA. To further dissect this relationship, we performed in vitro EMSA experiments employing GraL and nudE mRNA. However, stable GraL-nudE complexes were not detected, even though the detectable amount of unbound GraL decreased as increasing amounts of nudE mRNA were added. Interestingly, GraL is being bound by Hfq, but nudE easily displaces it. We also conducted a search for genes that are synthetic lethal when deleted along with GraL. This revealed 40 genes that are rendered essential by GraL deletion, however, they are involved in many different cellular processes and no clear correlation was found. The obtained data suggest that GraL's mechanism of action is non-canonical, unique and requires further research.
Źródło:
Acta Biochimica Polonica; 2018, 65, 1; 141-149
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Staphylococcus aureus as an infectious agent: overview of biochemistry and molecular genetics of its pathogenicity
Autorzy:
Plata, Konrad
Rosato, Adriana
Węgrzyn, Grzegorz
Powiązania:
https://bibliotekanauki.pl/articles/1040468.pdf
Data publikacji:
2009
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
Staphylococcus aureus
virulence
pathogenicity genes
toxins
methicillin resistance
Opis:
Although it is estimated that 20-30% of the general human population are carriers of Staphylococcus aureus, this bacterium is one of the most important etiological agents responsible for healthcare-associated infections. The appearance of methicillin resistant S. aureus (MRSA) strains has created serious therapeutical problems. Detailed understanding of the mechanisms of S. aureus infections seems necessary to develop new effective therapies against this pathogen. In this article, we present an overview of the biochemical and genetic mechanisms of pathogenicity of S. aureus strains. Virulence factors, organization of the genome and regulation of expression of genes involved in virulence, and mechanisms leading to methicilin resistance are presented and briefly discussed.
Źródło:
Acta Biochimica Polonica; 2009, 56, 4; 597-612
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Genetic algorithm combined with a local search method for identifying susceptibility genes
Autorzy:
Yang, C -H.
Moi, S. -H.
Lin, Y. -D.
Chuang, L. -Y.
Powiązania:
https://bibliotekanauki.pl/articles/91586.pdf
Data publikacji:
2016
Wydawca:
Społeczna Akademia Nauk w Łodzi. Polskie Towarzystwo Sieci Neuronowych
Tematy:
genetic algorithms
identifying susceptibility genes
local search algorithm
Opis:
Detecting genetic association models between single nucleotide polymorphisms (SNPs) in various disease-related genes can help to understand susceptibility to disease. Statistical tools have been widely used to detect significant genetic association models, according to their related statistical values, including odds ratio (OR), chi-square test (χ2), p-value, etc. However, the high number of computations entailed in such operations may limit the capacity of such statistical tools to detect high-order genetic associations. In this study, we propose lsGA algorithm, a genetic algorithm based on local search method, to detect significant genetic association models amongst large numbers of SNP combinations. We used two disease models to simulate the large data sets considering the minor allele frequency (MAF), number of SNPs, and number of samples. The three-order epistasis models were evaluated by chi-square test (χ2) to evaluate the significance (P-value < 0.05). Analysis results showed that lsGA provided higher chi-square test values than that of GA. Simple linear regression indicated that lsGA provides a significant advantage over GA, providing the highest β values and significant p-value.
Źródło:
Journal of Artificial Intelligence and Soft Computing Research; 2016, 6, 3; 203-212
2083-2567
2449-6499
Pojawia się w:
Journal of Artificial Intelligence and Soft Computing Research
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Prevalence of Beta Lactamases Genes in Sewage and Sludge Treated in Mechanical-Biological Wastewater Treatment Plants
Autorzy:
Zieliński, Wiktor
Buta, Martyna
Hubeny, Jakub
Korzeniewska, Ewa
Harnisz, Monika
Nowrotek, Monika
Płaza, Grażyna
Powiązania:
https://bibliotekanauki.pl/articles/124493.pdf
Data publikacji:
2019
Wydawca:
Polskie Towarzystwo Inżynierii Ekologicznej
Tematy:
WWTP
beta-lactamases
wastewater treatment
antibiotic resistance genes
Opis:
Wastewater treatment plants (WWTPs) are a very important link in the spread of antibiotic resistance genes to the environment and the formation of antibiotic-resistant microorganisms. The mechanical and biological methods of wastewater treatment in WWTPs do not completely remove the resistance genes from sewage. The genes responsible for extended-spectrum beta-lactamases (ESBLs) are very common in the family Enterobacteriaceae that colonize the human digestive tract and are abundant in wastewater. The aim of this study was to analyze the prevalence of genes encoding beta-lactamases in the wastewater and sludge samples collected from two WWTPs in the Polish regions of Warmia and Silesia and from the river water upstream and downstream from the WWTPs. The wastewater samples were passed through polycarbonate membrane filters, whereas the sludge samples were homogenized, and genomic DNA was extracted. The blaTEM, blaOXA and blaSHV genes were detected by means of standard PCR. The most prevalent gene was blaTEM which occurred in all samples, including the treated wastewater. The blaOXA gene was also frequently detected in all samples from the WWTP in Silesia. The blaSHV gene was least prevalent in the tested samples. These results indicate that wastewater is a hotspot for resistant bacteria. Beta-lactamase genes are not eliminated through the mechanical-biological wastewater treatment methods, and they can spread to other environments, thus increasing the pool of antibiotic resistance genes around the world and creating epidemiological risks.
Źródło:
Journal of Ecological Engineering; 2019, 20, 9; 80-86
2299-8993
Pojawia się w:
Journal of Ecological Engineering
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Postulation of leaf rust resistance genes of 20 wheat cultivars in southern Russia
Autorzy:
Volkova, G.V.
Kudinova, O.A.
Vaganova, O.F.
Powiązania:
https://bibliotekanauki.pl/articles/2082740.pdf
Data publikacji:
2020
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
Lr genes
Puccinia triticina
resistance cultivars
winter wheat
Opis:
Gene postulation is one of the fastest and most cost-effective methods for identifying seed- ling leaf rust resistance genes in wheat cultivars. Many researchers use this approach to identify Lr genes in wheat cultivars. The purpose of our research was to identify seedling leaf rust resistance genes in 20 wheat cultivars from different breeding centers of Russia, Ukraine and Germany. Forty-two near isogenic Thatcher lines and 10 Puccinia triticina isolates were used for gene postulation. When assessing the infection types to cultivars and lines, a scale was used, according to Oelke and Kolmer. In 20 wheat cultivars 19 Lr genes were postulated: 2c, 3, 10, 3bg, 3ka, 14a, 17, 18, 23, 25, 26, 30, 33, 40, 44, 50, B, Exch, Kanred. The most common for cultivars was the Lr10 gene. In five cultivars, showing high field resistance, most postulated seedling genes (Lr2c, Lr3, Lr10, Lr14а, Lr26, Lr33) were not effective in the adult stage. It is possible that resistance of such cultivars is associated with APR genes, the postulation of which requires an expansion in the number and spectrum of P. triticina isolate virulence. Most of the studied cultivars (60%) have recently been en- tered into the register (2015–2019) and in the field show a stable or moderately susceptible response to P. triticina infection, despite the fact that the Lr genes postulated in them were not effective in the adult stage. The data obtained indicated a variety of genotypes of the studied cultivars, as well as the tendency of breeders to use the effect of pyramiding ineffec- tive genes, which can prolong the resistance of the cultivar. Annual monitoring of varieties is necessary in each region, especially when reacting with a medium susceptible type (MS), which may indicate the initial stage of resistance loss.
Źródło:
Journal of Plant Protection Research; 2020, 60, 3; 225-232
1427-4345
Pojawia się w:
Journal of Plant Protection Research
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Larvicidal activity of Bacillus thuringiensis Colombian native strains against Bemisia tabaci (Hemiptera: Aleyrodidae)
Autorzy:
Cabra, E.T.
Hernandez Fernandez, J.A.
Powiązania:
https://bibliotekanauki.pl/articles/2084862.pdf
Data publikacji:
2019
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
biological control
genes cry
insect pest
molecular characterization
Opis:
The whitefly, Bemisia tabaci, an insect of the order Hemiptera which attacks more than 600 species of plants, is one of the most important agricultural pests around the world. The insecticidal Cry proteins from Bacillus thuringiensis (Bt) are useful biological pesticides, and some are toxic to Hemipteran insects. In this study, Colombian native isolates of Bt were functionally characterized at molecular and biological levels. The strains contained between one and five different crystal shapes: round, triangular, amorphous, bipyramidal and squared. The strains presented between three to seven bands of proteins in their electrophoretic pattern that were organized into six groups according to their possible biological activity on insect pests. Cry1Aa, cry1Ab, cry1Ac, cry1B and cry1C genes were identified for PCR in the different Bt isolates. Bioassays were performed on tomato leaves whose surface was spread with 3 µg · ml−1 crude extract of Bt toxins. Second instar larvae of whitefly, which were placed on top of leaves and exposed to the toxins for 7 days, exhibited mortalities from 18 to 69%. The lethal concentration 50 (LC50) of ZBUJTL39, Bt kurstaki HD1 and ZCUJTL9 strains were 1.83, 1.85 and 2.16 μg · ml−1, respectively (p < 0.05). These results show that the native Bt strain ZBUJTL39, which contained the genes cry1Aa, cry1Ab, cryCa and cryBa could eventually be used for the development of an integrated management program together with other tools for the control of B. tabaci.
Źródło:
Journal of Plant Protection Research; 2019, 59, 4; 503-511
1427-4345
Pojawia się w:
Journal of Plant Protection Research
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Changes is genes coding for laccases 1 and 2 may contribute to deformation and reduction of wings in apollo butterfly (Parnassius apollo, Lepidoptera: Papilionidae) from the isolated population in Pieniny National Park (Poland)
Autorzy:
Łukasiewicz, Kinga
Węgrzyn, Grzegorz
Powiązania:
https://bibliotekanauki.pl/articles/1038862.pdf
Data publikacji:
2016
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
apollo butterfly
deformed wings
reduced wings
genes of laccases
Opis:
An isolated population of apollo butterfly (Parnassius apollo, Lepidoptera: Papilionidae) occurs in Pieniny National Park (Poland). Deformations and reductions of wings in a relatively large number of individuals from this population is found, yet the reasons for these defects are unknown. During studies devoted to identify cause(s) of this phenomenon, we found that specific regions of genes coding of enzymes laccases 1 and 2 could not be amplified from DNA samples isolated from large fractions of malformed insects while expected PCR products were detected in almost all (with one exception) normal butterflies. Laccases (p-diphenol:dioxygen oxidoreductases) are oxidases containing several copper atoms. They catalyse single-electron oxidations of phenolic or other compounds with concomitant reduction of oxygen to water. In insects, their enzymatic activities were found previously in epidermis, midgut, Malpighian tubules, salivary glands, and reproductive tissues. Therefore, we suggest that defects in genes coding for laccases might contribute to deformation and reduction of wings in apollo butterflies, though it seems obvious that deficiency in these enzymes could not be the sole cause of these developmental improperties in P. apollo from Pieniny National Park.
Źródło:
Acta Biochimica Polonica; 2016, 63, 1; 177-180
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Resistance to PVM in potato parental lines bred in Młochów Research Center, IHAR.
Autorzy:
Chrzanowska, Mirosława
Sieczka, Maria Teresa
Zagórska, Helena
Powiązania:
https://bibliotekanauki.pl/articles/2199953.pdf
Data publikacji:
2002-12-22
Wydawca:
Instytut Hodowli i Aklimatyzacji Roślin
Tematy:
potato
PVM
resistance genes Rm
Gm
reaction to infection
Opis:
During last 22 years in the Potato Genetics and Parental Lines Department at Młochów Research Center more than 210 parental lines resistant to Potato virus M (PVM) have been bred. Genes controlling resistance to PVM originated from two sources Solanum megistacrolobum (the gene Rm) or/and S. gourlayi (the gene Gm) were introduced into tetraploid breeding material. From these resistant lines 59 progenitors were chosen and offered to the potato breeders. The first resistant to PVM cultivar Triada and second one cv. Korona were registered in Poland in 1996 and 2002, respectively. At present 13 advanced breeding clones from different breeding stations derived from progenitors offered to breeders in 1986-1990 are evaluated in Preliminary Trials. One candidate cultivar tested in Registration Trials appeared to be resistant to PVM. Moreover 15 advanced breeding clones derived from progenitors offered during 1991-1995 were tested in Preliminary Trials. The mechanical and graft inoculations were used to identify the type of resistance to PVM in potatoes. The parental lines, which resistance to PVM is controlled by the gene Rm or/and Gm, express field resistance even under the high natural infection pressure. Increasing number of resistant to PVM new potato cultivars is expected.
Źródło:
Plant Breeding and Seed Science; 2002, 46, 2; 57-65
1429-3862
2083-599X
Pojawia się w:
Plant Breeding and Seed Science
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Genetic factors contributing to the development of inguinal hernias – a narrative review
Autorzy:
Kalali, Datis
Powiązania:
https://bibliotekanauki.pl/articles/40614533.pdf
Data publikacji:
2024-06-30
Wydawca:
Uniwersytet Rzeszowski. Wydawnictwo Uniwersytetu Rzeszowskiego
Tematy:
genes
genetics
genome-wide association
inguinal hernias
polymorphisms
studies
Opis:
Introduction and aim. Inguinal hernias are one of the major disorders in the field of general and visceral surgery and can be viewed as multifactorial diseases. Although the molecular mechanism that led to predistortion to inguinal herniation still remain unclear, is well known that defects leading to improper closure of the inguinal canal during fetal development and mechanisms contributing to weaker muscles of the abdominal wall can greatly increase the risk of developing the latter disease. Material and methods. A literature search was performed in all major electronic databases using keywords and Boolean operators to retrieve all available literature related to the topic. Due to the narrative nature of the review, there were no specific inclusion and exclusion criteria. Analysis of the literature. Genetic factors, undoubtedly, can interfere with these mechanisms and therefore play major role in developing hernias. To this end, the present narrative review provides an overview of genes with altered expression and genetic polymorphisms associated with inguinal herniation. Moreover, the results of genome-wide association studies (GWAS) exploring susceptible genetic loci associated with the disease have been reported. Conclusion. Nevertheless, more case-control studies and GWAS need to be conducted in different ethnic populations so as to provide better insights into the topic.
Źródło:
European Journal of Clinical and Experimental Medicine; 2024, 22, 2; 417-423
2544-2406
2544-1361
Pojawia się w:
European Journal of Clinical and Experimental Medicine
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Polymorphisms in the p53 pathway genes and micronucleus occurrence in Chinese vinyl chloride-exposed workers
Autorzy:
Li, Yong
Feng, Nan-Nan
Zhang, Guang-Hui
Wang, Qi
Hao, Yan-Hui
Nanzhang, Ya
Long, Changxu
Li, Yongliang
Brandt-Rauf, Paul W.
Xia, Zhao-Lin
Powiązania:
https://bibliotekanauki.pl/articles/2179059.pdf
Data publikacji:
2013-12-01
Wydawca:
Instytut Medycyny Pracy im. prof. dra Jerzego Nofera w Łodzi
Tematy:
VC
occupational exposure
p53 pathway genes
genetic polymorphism
Opis:
Objectives: To investigate the association between polymorphisms in the p53 pathway genes and chromosomal damage in vinyl chloride (VC)-exposed workers. Materials and Methods: Cytokinesis block micronucleus test was performed in 310 VC-exposed workers and 149 non-exposed workers to determine chromosomal damage. The polymerase chain reaction and restriction fragment length polymorphism technique were used to detect six SNPs in the p53 pathway genes involved in the cell cycle. Results: There was a highly significant dose-response relationship between VC exposure and chromosomal damage. Individuals carrying the variant genotypes were at higher risk for chromosomal damage compared with their wild type genotype: p53rs1042522, MDM2 Del1518rs3730485, MDM2rs2279744 and GADD45Ars532446. On the other hand, individuals possessing the variant genotype of CDKN2A rs3088440 had significantly decreased risk compared with the corresponding wild-type. Conclusions: Genetic polymorphisms in P53 pathway genes may have an impact on VC-induced chromosomal damage.
Źródło:
International Journal of Occupational Medicine and Environmental Health; 2013, 26, 6; 825-836
1232-1087
1896-494X
Pojawia się w:
International Journal of Occupational Medicine and Environmental Health
Dostawca treści:
Biblioteka Nauki
Artykuł

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