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Wyświetlanie 1-9 z 9
Tytuł:
Molecular Identification of Free-living Amoebae Isolated from Artificial Water Bodies Located in Poland
Autorzy:
LEOŃSKA-DUNIEC, Agata
SKOTARCZAK, Bogumiła
ADAMSKA, Małgorzata
Powiązania:
https://bibliotekanauki.pl/articles/763628.pdf
Data publikacji:
2015
Wydawca:
Uniwersytet Jagielloński. Wydawnictwo Uniwersytetu Jagiellońskiego
Tematy:
Artificial water samples, free living amoebae, thermal tolerance test, PCR, DNA sequencing, Acanthamoeba, Vermoamoeba
Opis:
Free living amoebae (FLA) are amphizoic protozoa that are widely found in various environmental sources. They are known to cause serious human infections, including a fatal encephalitis, a blinding keratitis, and pneumonia. The main aim of the study was detection and molecular identification of Acanthamoeba spp., Naegleria fowleri, Balamuthia mandrillaris, Sappinia pedata, and Vermoamoeba vermiformis (formerly Hartmannella vermiformis) in artificial water bodies in North-Western Poland. We examined 86 water samples collected during 2-year period from 43 water bodies, including outdoor and indoor swimming pools, firefighting reservoirs, fountains, as well as water network. The samples were filtrated using Filta-Max® membrane filters (IDEXX Laboratories, USA) and, in order to select potentially pathogenic, thermophilic strains and to limit the number of PCR examined samples, the thermal tolerance test was carried out. Obtained filtrates were transferred to non-nutrient agar plates with E. coli. The agar plates were incubated at 37°C and then proliferated amoebae were passaged at 42°C. DNA was extracted from the thermophilic trophozoites and then polymerase chain reactions and sequence analysis were performed for molecular identification of FLA. From the 86 collected water samples 57 strains of FLA were able to proliferate at 37°C and 7 of them showed ability to proliferate at 42°C. For molecular identification of Acanthamoeba spp. and V. vermiformis, regions of 18S rDNA were amplified. In order to detect B. mandrillaris DNA, we used mitochondrial 16S rDNA as a marker, and for detection of N. fowleri and S. pedata – ITS regions. Based on molecular analysis, isolates were classified to the genus Acanthamoeba (T4 and T11 genotypes, as well as the new genotypes detected earlier in clinical samples and named T16) and V. vermiformis species. Detected strains were highly similar or identical to pathogenic strains detected earlier in patients. Our results show a wide distribution of potential pathogenic FLA, as Acanthamoeba T4, T11, T16 genotypes, and V. vermiformis species in various artificial water bodies located in North-Western Poland and suggest a potential threat to health of humans in this part of the country.
Źródło:
Acta Protozoologica; 2015, 54, 1
1689-0027
Pojawia się w:
Acta Protozoologica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Wpływ soku z bulw ziemniaka na czułość wykrywania kwarantannowych bakterii Ralstonia solanacerum [sprawcy brunatnej zgnilizny ziemniaka] klasycznym testem PCR
Effect of potato tuber sap on the sensitivity of detection of quarantine bacteria Ralstonia solanacerum [the culprit of brown rot in potatoes] using the classic PCR test
Autorzy:
Salamonska, K.
Szarek, D.
Przewodowski, W.
Labanska, M.
Powiązania:
https://bibliotekanauki.pl/articles/2135417.pdf
Data publikacji:
2020
Wydawca:
Instytut Hodowli i Aklimatyzacji Roślin
Tematy:
ochrona roslin
ziemniaki
choroby bakteryjne
choroby kwarantannowe
brunatna zgnilizna ziemniaka
Ralstonia solanacearum
testy diagnostyczne
test PCR
Opis:
Brunatna zgnilizna ziemniaka jest chorobą kwarantannową wymagającą czułej, szybkiej i specyficznej diagnostyki. Jedną z bardziej skutecznych metod wykrywania bakterii R. solanacearum jest moleku- larny test PCR. Przedstawiono metodę izolacji DNA, która umożliwia usunięcie inhibitorów polimerazy DNA znajdujących się m.in. w soku z bulw ziemniaka. Efektem obecności tych związków w badanej próbie DNA może być fałszywie negatywny wynik testu. Na podstawie otrzymanych rezultatów stwier- dzono skuteczność opisanej metody izolacji DNA do wykrywania bakterii R.solanacearum. Uzyskano porównywalne wyniki klasycznego testu PCR z DNA izolowanego z bakterii zawieszonych w soku z bulw ziemniaka oraz z zawiesin w wodzie – bez inhibitorów reakcji PCR. Dzięki opracowanej metody- ce izolacji DNA czułość testu PCR osiągnęła stosunkowo wysoki poziom wykrywania 5-15 komórek bakteryjnych w badanej próbie.
Źródło:
Ziemniak Polski; 2020, 30, 4; 47-52
1425-4263
Pojawia się w:
Ziemniak Polski
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Metody identyfikacji gatunkowej grzybów z rodzaju Candida. Część II. Techniki molekularne
Methods for species identification of genus Candida fungi. Part II. Molecular techniques
Autorzy:
Gnat, Sebastian
Powiązania:
https://bibliotekanauki.pl/articles/22326536.pdf
Data publikacji:
2022
Wydawca:
Krajowa Izba Lekarsko-Weterynaryjna
Tematy:
choroby grzybicze
grzybice
Candida
identyfikacja gatunkowa
metody
metody molekularne
test PCR
metoda multiplex PCR
metoda nested-PCR
metoda real time PCR
fluorescencyjna hybrydyzacja in situ
spektrometria mas MALDI-TOF MS
czynniki chorobotwórcze
grzyby chorobotwórcze
łańcuchowa reakcja polimerazy
piroliza ze spektometrią mas
identification
molecular techniques
MALDI-TOF MS
Opis:
A rapid and accurate identification of the Candida is crucial for clinical treatment of local and systemic candidiasis. Premature diagnosis of invasive fungal infections is problematic because most clinical signs are non-specific and cultures are often negative or become positive too late for the initiation of effective antifungal therapy. Therefore, studies have been performed to improve molecular techniques for the diagnosis of candidiasis. Today, molecular strategies, such as PCR and non-PCR based methods are used to complement conventional laboratory approach. They provide accurate results in much short time of 1.5–3 h. Given the high accuracy and time saving with molecular typing techniques it is likely that most of these methods could improve routine clinical laboratory identification of Candida yeast species. However, further studies are needed for standardization of such procedures. This article presents an overview and discussion on molecular identification methods in the context of their application for the diagnosis of Candida fungi. Particular attention has been focused on the advantages and limitations of the indicated methods and the possibilities of their implementation for routine use in clinical laboratories.
Źródło:
Życie Weterynaryjne; 2022, 97, 03; 167-174
0137-6810
Pojawia się w:
Życie Weterynaryjne
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Anticancer activity of new molecular hybrids combining 1,4-naphthalenedione motif with phosphonic acid moiety in hepatocellular carcinoma HepG2 cells
Autorzy:
Długosz, Angelika
Gach, Katarzyna
Szymański, Jacek
Modranka, Jakub
Janecki, Tomasz
Janecka, Anna
Powiązania:
https://bibliotekanauki.pl/articles/1038683.pdf
Data publikacji:
2017
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
MTT test
apoptosis
real-time PCR
flow cytometry
Opis:
Structural motifs found in naturally occurring compounds are frequently used by researchers to develop novel synthetic drug candidates. Some of these new agents are hybrid molecules which are designed through a concept of combining more than one functional element. In this report, anticancer activity of new synthetic molecular hybrids, substituted 3-diethoxyphosphorylnaphtho[2,3-b]furan-4,9-diones and 3-diethoxyphosphorylbenzo[f]indole-4,9-diones, which integrate natural 1,4-naphtalenedione scaffold, present in several anticancer agents, with pharmacophoric phosphonate moiety, were tested against hepatocellular cell line HepG2. Cytotoxicity was examined using MTT assay. Two most potent compounds, furandione 8a and benzoindoldione 12a, which reduced the number of viable HepG2 cells with the IC50 values of 4.13 µM and 5.9 µM, respectively, were selected for further research. These compounds decreased the mRNA expression levels of several genes: Bcl-2, angiogenic vascular endothelial growth factor (VEGF), c-Fos, caspase-8 and increased the expression of Bax, caspase-3 and -9, c-Jun, p21, p53, as determined by quantitative real-time PCR. The ability of these compounds to induce apoptosis and DNA damage was studied by flow cytometry. The obtained data showed that the new compounds inhibited cell viability by increasing apoptosis and decreasing angiogenesis. Compound 8a was a much stronger apoptosis inducer as compared with 12a and strongly activated the intrinsic pathway of apoptosis, associated with the loss of mitochondrial membrane potential and changes in Bax/Bcl-2 ratio. These findings show that the synthetic hybrids combining 1,4-naphthalenedione system and phosphonic acid moiety display potential to be further explored in the development of new anticancer agents.
Źródło:
Acta Biochimica Polonica; 2017, 64, 1; 41-48
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Opracowanie czułych metod wykrywania najważniejszych wirusów ziemniaka
Development of sensitive methods for detection of the most important potato viruses
Autorzy:
Treder, Krzysztof
Mielczarek, Mateusz
Pawłowska, Anna
Zacharzewska, Bogumiła
Fedczak, Maria
Powiązania:
https://bibliotekanauki.pl/articles/2199563.pdf
Data publikacji:
2019-11-30
Wydawca:
Instytut Hodowli i Aklimatyzacji Roślin
Tematy:
test ELISA
RT-PCR
RT-LAMP
wirusy ziemniaka
wykrywanie
ziemniak
Źródło:
Biuletyn Instytutu Hodowli i Aklimatyzacji Roślin; 2019, 286; 261-264
0373-7837
2657-8913
Pojawia się w:
Biuletyn Instytutu Hodowli i Aklimatyzacji Roślin
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
A clinical utility of a strip test for influenza A/B and comparison with detection by RT PCR
Autorzy:
Miarka, Maciej
Horban, Andrzej
Maliszewska, Henryka
Biliński, Przemysław
Prus-Kowalczuk, Wanda
Powiązania:
https://bibliotekanauki.pl/articles/1039251.pdf
Data publikacji:
2014
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
A/H1N1/v influenza virus
strip test
influenza RT PCR
Opis:
Introduction and objective: In June 2009 the World Health Organization announced influenza pandemic caused by A/H1N1/v virus. It became crucial to recognize new cases of A/H1N1/v infection. An effective screening diagnostic procedure was needed for patients suffering from influenza-like symptoms for making an initial diagnosis and analyzing epidemiological pattern of infection. We used a strip test for influenza A/B as a screening diagnostic procedure for patients suffering from influenza-like symptoms for making an initial diagnosis. For comparison, RT PCR for detecting A/H1N1/v was performed. The aim of this study was to assess the efficacy and sensitivity of the strip test and its value for making initial diagnosis of influenza A/H1N1/v. Material and methods: Strip testing for the influenza A/B infection was performed on 1123 patients with influenza-like symptoms in the Admission Unit of the Regional Infectious Diseases Hospital in Warsaw. Strip test results were analyzed according to the age of patients and season of the year. For 97 patients strip test results for detecting A/H1N1 infection were compared with those obtained by RT PCR. Results: There were no statistically significant differences found between the methods and strip testing demonstrated sensitivity of 61% and specificity of 71%. Conclusions: No statistically significant differences were found between the two methods, however, strip test had low sensitivity and specificity.
Źródło:
Acta Biochimica Polonica; 2014, 61, 3; 485-487
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Investigation of the presence of Aspergillus flavus in mastitis milk with PCR
Autorzy:
Sukru, K.
Ugur, P.
Ugur, A.
Tugba, Y.H.
Powiązania:
https://bibliotekanauki.pl/articles/2049754.pdf
Data publikacji:
2019
Wydawca:
Fundacja na Rzecz Młodych Naukowców
Tematy:
Aspergillus flavus
mastitis
milk sample
aflatoxin M1
ELISA test
polymerase chain reaction
A. flavus
Aflatoxin M1
mastitis milk
ELISA
PCR
Opis:
In this study, milk samples were taken in sterile 20 ml containers from 90 cows with clinical mastitis in various enterprises around Aydın province between May-September 2017. The presence of Aspergillus flavus M1 toxin in milk samples was investigated by ELISA. Aflatoxin M1 ELISA results were compared with positive controls with 0 ppt, 5 ppt, 15 ppt, 30 ppt, 60 ppt and 100 ppt. For the 88 samples examined; 5 ppt in 7 (8,0 %), 15 ppt in 12 (13,6 %), 100 ppt in 32 (36,4 %) and 0 ppt in 37 (42,0 %) aflatoxin M1 was detected. According to these results, 32 (36,4 %) AFM1 positivity was detected in the European Union countries over the limit (50 ppt) accepted for raw milk. In our study, DNA obtained from 88 mastitis milk samples examined with Aflatoxin M1 ELISA kit was subjected to Aspergillus flavus species specific PCR process. As a result of PCR; Aflatoxin M1 at a level of 0 ppt in 7 (36,8 %), 5 ppt in 1 (% 5,2), 15 ppt in 2 (10,5 %) and 100 ppt in 9 (47,5 %) ELISA kit toxin presence was determined. As a result, 32 samples of 100 ppt AFM1 positivity were detected by ELISA and 9 samples 100 ppt positivity was detected by PCR in our study. The results of the ELISA test revealed that more positive results were formed due to cross-reactions, and the PCR method with FLA gene primers was more reliable for diagnosis.
Źródło:
Environment, Earth and Ecology; 2019, 3, 1; 35-41
2543-9774
2451-4225
Pojawia się w:
Environment, Earth and Ecology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Patogeneza i diagnostyka parwowirozy psów oraz genotypowanie CPV-2
Pathogenesis and diagnostics of canine parvovirosis and genotyping of CPV-2
Autorzy:
Kowalczyk, M.
Skrzypek, K.
Jakubczak, A.
Powiązania:
https://bibliotekanauki.pl/articles/858760.pdf
Data publikacji:
2018
Wydawca:
Krajowa Izba Lekarsko-Weterynaryjna
Tematy:
psy
choroby zwierzat
parwowiroza psow
patogeneza
parwowirus psow
wirus CPV-2
charakterystyka molekularna
wykrywanie
diagnostyka
metody
odczyn hemaglutynacji
test zahamowania hemaglutynacji
testy serologiczne
diagnostyka molekularna
test ELISA
lancuchowa reakcja polimerazy
metoda real time PCR
metoda qPCR
genotypowanie
Źródło:
Życie Weterynaryjne; 2018, 93, 07
0137-6810
Pojawia się w:
Życie Weterynaryjne
Dostawca treści:
Biblioteka Nauki
Artykuł
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