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Wyszukujesz frazę "marker gene" wg kryterium: Temat


Tytuł:
Transformation of wild Solanum species resistant to late blight by using reporter gene gfp and msh2 genes
Autorzy:
Rakosy-Tican, Lenuta
Aurori, Adriana
Aurori, Cristian M.
Ispas, Gabriela
Famelaer, Ivan
Powiązania:
https://bibliotekanauki.pl/articles/2198986.pdf
Data publikacji:
2004-12-20
Wydawca:
Instytut Hodowli i Aklimatyzacji Roślin
Tematy:
Agrobacterium tumefaciens mediated transformation
DNA mismatch repair
gfp
nptII marker gene
Opis:
Green fluorescent protein (gfp) reporter gene and nptII marker gene were used to optimize Agrobacterium tumefaciens (agro) mediated transformation of wild Solanum genotypes resistant to late blight. Different genotypes of Solanum bulbocastanum, S. chacoense, S. microdontum and S. verrucosum were assessed for their regeneration ability on MS based media and for agro-mediated transformation. As the first step reporter genes were used to optimize transformation protocol for each species and then the transfer of genes involved in mismatch repair of DNA were attempted in Solanum chacoense. For transformation, either leaf or stem fragments were used. It was shown that gfp is a valuable and elegant tool for monitoring the efficiency of transformation or the occurrence of chimera in all genotypes. Transformation efficiency was dependent on a plant genotype. A number of genotypes have been successfully transformed and they expressed constitutively the bright green fluorescence of gfp without any side effects. The most recalcitrant species proved to be S. microdontum, which did not regenerate plants although different media and phytohormones had been used. The best protocol for S. chacoense transformation was also found to work in the transfer of msh2 genes. Msh2 isolated from Arabidopsis was used and transferred either as mutated (Apa) or antisense (As) gene. The integration of msh2-mutated gene into S. chacoense genome was demonstrated by PCR amplification and confirmed by RT-PCR for some of the putative transgenic clones. The implications of mismatch repair in homologous recombination and its importance for potato improvement are discussed. 
Źródło:
Plant Breeding and Seed Science; 2004, 50; 119-127
1429-3862
2083-599X
Pojawia się w:
Plant Breeding and Seed Science
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Role of the polycomb repressive complex (PRC2) in the induction of somatic embryogenesis Medicago truncatula cv. Jemalong
Autorzy:
Orlowska, A.
Igielski, R.
Kepczynska, E.
Powiązania:
https://bibliotekanauki.pl/articles/951214.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
somatic embryogenesis
somatic cell
marker gene
leafy cotyledon1
embryogenesis
polycomb repressive complex
Medicago truncatula
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2015, 96, 1
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Apoplastic ROS sensing and signalling
Autorzy:
Kangasjarvi, J.
Powiązania:
https://bibliotekanauki.pl/articles/80047.pdf
Data publikacji:
2013
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
conference
reactive oxygen species
signalling
plant cell
stress adaptation
acclimation
cysteine-rich protein
extracellular protein
gene regulation
marker gene
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2013, 94, 2
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Integrated statistical and rule-mining techniques for dna methylation and gene expression data analysis
Autorzy:
Mallik, S.
Mukhopadhyay, A.
Maulik, U.
Powiązania:
https://bibliotekanauki.pl/articles/1396742.pdf
Data publikacji:
2013
Wydawca:
Społeczna Akademia Nauk w Łodzi. Polskie Towarzystwo Sieci Neuronowych
Tematy:
statistical analysis
gene marker
methylation
genetic algorithm
DNA
Opis:
For determination of the relationships among significant gene markers, statistical analysis and association rule mining are considered as very useful protocols. The first protocol identifies the significant differentially expressed/methylated gene markers, whereas the second one produces the interesting relationships among them across different types of samples or conditions. In this article, statistical tests and association rule mining based approaches have been used on gene expression and DNA methylation datasets for the prediction of different classes of samples (viz., Uterine Leiomyoma/class-formersmoker and uterine myometrium/class-neversmoker). A novel rule-based classifier is proposed for this purpose. Depending on sixteen different rule-interestingness measures, we have utilized a Genetic Algorithm based rank aggregation technique on the association rules which are generated from the training set of data by Apriori association rule mining algorithm. After determining the ranks of the rules, we have conducted a majority voting technique on each test point to estimate its class-label through weighted-sum method. We have run this classifier on the combined dataset using 4-fold cross-validations, and thereafter a comparative performance analysis has been made with other popular rulebased classifiers. Finally, the status of some important gene markers has been identified through the frequency analysis in the evolved rules for the two class-labels individually to formulate the interesting associations among them.
Źródło:
Journal of Artificial Intelligence and Soft Computing Research; 2013, 3, 2; 101-115
2083-2567
2449-6499
Pojawia się w:
Journal of Artificial Intelligence and Soft Computing Research
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Activity of hygromycin phosphotransferase marker gene optimized for expression in plants for the construction of vectors for genetic modifications of grasses
Autorzy:
Malec, K.
Kowalska, M.
Podkowinski, J.
Zielinska, M.
Cerazy, J.
Slusarkiewicz-Jarzina, A.
Ponitka, A.
Jezowski, S.
Pniewski, T.
Powiązania:
https://bibliotekanauki.pl/articles/951205.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
conference
plant biotechnology
hygromycin phosphotransferase
genetic modification
grass
Miscanthus x giganteus
Miscanthus sinensis
Miscanthus sacchariflorus
genetic engineering
plant transformation
marker gene
molecular biology
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2015, 96, 1
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Linkage and interdependence of A2MD1 and A2ME2 alpha2-macroglobulin genes in cattle
Autorzy:
Wegrzyn, J
Skiba, E
Krzyscin, P
Powiązania:
https://bibliotekanauki.pl/articles/2047144.pdf
Data publikacji:
1997
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
antigen marker
gene
animal production
alpha2-macroglobulin
cattle
antigenic determinant
protein
marker
A2MD1 gene
A2ME2 gene
Opis:
The transmission of previously described genes A2MD1 and A2ME2 that determine antigenic markers of alpha₂-macroglobulins A₂mD1 and А₂mЕ2 in cattle was studied. The starting point for the analyses was the lack of individuals negative for both markers in the population of 3551 Black-and-White, Red-and-White, Polish Red and Simmental cattle and interbreed crosses. Controlling of these specificities by allelic genes or genes from closely linked loci was considered. To support or reject this hypothesis, the independence test 2 x 2 and analysis of segregation of A₂mD1 and А₂mЕ2 in the offsprings of all phenotypic matings found and of selected matings in which genotypes of sires were determined, were used. It was found that the observed segregation of antigenic markers in the offsprings rules out the possibility that they are determined by allelic genes. The results obtained show that markers A₂mD1 and А₂mЕ2 are controlled by the genes A2MD1 and A2ME2 from closely linked loci. Moreover it seems that only those haplotypes are transmitted in which both genes - A2MD1 and A2ME2, or one of them - A2MD1 or A2ME2, are present. No haplotypc would then be transmitted (would occur?) in which both genes are in the recessive form. recessive form.
Źródło:
Journal of Applied Genetics; 1997, 38, 2; 187-193
1234-1983
Pojawia się w:
Journal of Applied Genetics
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Identification of four new est-based markers on the apple (Malus × domestica) genetic map
Autorzy:
Keller-Przybylkowicz, S.
Korbin, M.
Powiązania:
https://bibliotekanauki.pl/articles/1855.pdf
Data publikacji:
2014
Wydawca:
Instytut Ogrodnictwa
Tematy:
comparative mapping
CAPS marker
gene coding
SSR marker
ascorbic acid
sugar metabolism
apple
Malus x domestica
Źródło:
Journal of Horticultural Research; 2014, 22, 1
2300-5009
Pojawia się w:
Journal of Horticultural Research
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Identification of fecundity gene [FecB] carriers using microsatellite markers and its effect on sheep weight
Autorzy:
Nowak, Z
Charon, K.M.
Powiązania:
https://bibliotekanauki.pl/articles/2041928.pdf
Data publikacji:
2001
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
fecundity gene
microsatellite marker
sheep
animal breeding
body weight
weight
identification
Źródło:
Journal of Applied Genetics; 2001, 42, 1; 49-57
1234-1983
Pojawia się w:
Journal of Applied Genetics
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Plasminogen activator inhibitor-1 (PAI-1) gene 4G/5G promoter polymorphism is not associated with breast cancer.
Autorzy:
Błasiak, Janusz
Smolarz, Beata
Powiązania:
https://bibliotekanauki.pl/articles/1044431.pdf
Data publikacji:
2000
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
gene polymorphism
PAI-1 gene
prognostic marker
plasminogen activator inhibitor-1 (PAI-1)
breast cancer
Opis:
The antigen content of plasminogen activator inhibitor-1 (PAI-1) in primary breast cancer tissue extracts may be of strong prognostic value: high levels of PAI-1 in tumors predict poor prognosis for patients. The gene encoding PAI-1 is highly polymorphic and an insertion (5G)/deletion (4G) polymorphism in the PAI-1 gene promoter (the 4G/5G polymorphism), may have functional significance in PAI-1 expression. In the present work the distribution of genotypes and frequency of alleles of the 4G/5G polymorphism in subjects with breast cancer were investigated. Tumor tissues were obtained from 100 postmenopausal women with node-negative and node-positive ductal breast carcinoma with uniform tumor size. Blood samples from age matched healthy women served as control. The 4G/5G polymorphism was determined by PCR amplification using the allele specific primers. The distribution of the genotypes of the 4G/5G polymorphism in both control and patients did not differ significantly (P > 0.05) from those predicted by the Hardy-Weinberg distribution. There were no differences in the genotype distributions and allele frequencies between node-positive and node-negative patients. The 4G/5G polymorphism may not be linked with elevated level of PAI-1 observed in breast cancer and therefore may not be associated with appearance and/or progression of breast cancer.
Źródło:
Acta Biochimica Polonica; 2000, 47, 1; 191-199
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Molecular markers for leaf rust resistance genes in wheat
Autorzy:
Chelkowski, J
Stepien, L.
Powiązania:
https://bibliotekanauki.pl/articles/2041986.pdf
Data publikacji:
2001
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
brown rust
wheat
stem rust
plant genetics
resistance gene
fungi
molecular marker
yellow rust
Źródło:
Journal of Applied Genetics; 2001, 42, 2; 117-126
1234-1983
Pojawia się w:
Journal of Applied Genetics
Dostawca treści:
Biblioteka Nauki
Artykuł

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