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Tytuł:
Wpływ sposobu przygotowania gleby na aktywność biologiczną gleby względem patogenów korzeni w 40-letnim drzewostanie sosnowym
Effect of pre-planting soil preparation on biological activity of soil towards root rot pathogens in 40-year-old Scots pine stand
Autorzy:
Kwaśna, H.
Łakomy, P.
Gornowicz, R.
Borowczyk-Behnke, J.
Kuźmiński, R.
Powiązania:
https://bibliotekanauki.pl/articles/973542.pdf
Data publikacji:
2015
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
przygotowanie gleby
mikroorganizmy glebowe
grzyby glebowe
bakterie glebowe
sosna zwyczajna
Armillaria
Heterobasidion
leśnictwo
uprawy leśne
gleby leśne
aktywność biologiczna
drzewa leśne
zdrowotność roślin
stopień porażenia
armillaria
heterobasidion
scots pine
soil preparation
soil suppressiveness
Opis:
Effects of pre−planting soil preparation on the clear−cut on the community structure of soil fungi and bacteria, their possible biological activity towards Armillaria and Heterobasidion, and mortality of Scots pine trees were studied in 40−year−old Scots pine plantation in Międzychód Forest District (W Poland). Pre−planting soil preparation included: (i) deep ploughing, (ii) shallow furrowing, (iii) making holes for planting, and (iv) shallow turning of the topsoil. The soil−dilution method was used for detection of fungi and bacteria in soil. Morphotyping was used for identification of fungi. Phenotypic traits and biochemical properties were used for identification of bacteria. Molecular method, MID−66 or BIOLOG® systems were additionally applied for identification of the most common bacteria. Deep furrowing, making holes for planting or shallow turning of the topsoil before planting increased abundance of fungi and bacteria in soil 40 years after treatment. Increased abundance of fungi and bacteria was associated with increased presence of taxa considered as antagonistic to Armillaria and Heterobasidion. The highest mortality of Scots pines was observed on sites with deep ploughing or shallow furrowing before planting, while the lowest mortality was found on sites with making holes for planting or shallow turning of the topsoil. The majority of dead trees were infected by H. annosum. Moderate intervention into the soil habitat on the clear−cut site before planting of Scots pine seedlings seems to create the habitat beneficial for the future growth of trees.
Źródło:
Sylwan; 2015, 159, 02; 177-125
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Struktura zbiorowisk grzybów i bakterii w glebie 1-rocznej uprawy i 10-letniego młodnika w zależności od sposobu przygotowania gleby
Structure of fungal and bacterial communities in 1-year and 10-year-old plantations of Scots pine after different pre-planting preparation of soil
Autorzy:
Kwaśna, H.
Łakomy, P.
Gornowicz, R.
Mikiciński, A.
Borowczyk-Behnke, J.
Gałązka, S.
Powiązania:
https://bibliotekanauki.pl/articles/989686.pdf
Data publikacji:
2015
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
uprawy lesne
uprawy sosnowe
mlodniki sosnowe
sosna zwyczajna
Pinus sylvestris
przygotowanie gleby
gleby lesne
aktywnosc biologiczna
grzyby glebowe
bakterie glebowe
wystepowanie
zbiorowiska bakterii
zbiorowiska grzybow
struktura zbiorowisk
armillaria
heterobasidion
scots pine
silvicultural techniques
soil biological activity
Opis:
Effects of post−harvest wood−debris utilization and pre−planting soil preparation in clear−cut forest on the community structure of soil fungi and bacteria and their possible biological activity towards Armillaria and Heterobasidion were studied in 1− and 10−year−old Scots pine plantations in Bierzwnik and Międzychód Forest Districts (W Poland). Post−harvest wood−debris utilization included: (i) removal from the surface, (ii) spread of the coarse or chipped wood−debris on the surface and (iii) mixing of the chipped wood debris with the soil. Pre−planting soil preparation included: (i) deep furrowing, (ii) shallow turning of the topsoil, (iii) ridging and (iv) no ground preparation. The soil−dilution method was used for detection of fungi and bacteria in soil. Morphotyping was used for identification of fungi. Phenotypic traits and biochemical properties were used for identification of bacteria. Molecular method, MID−66 or BIOLOG® systems were additionally applied for identification of the most common bacteria. Removal of post−harvest wood−debris from the surface of the clear−cut land and shallow turning of the topsoil or ridging before planting increased abundance of fungi in soil of 1−year−old Scots pine plantation. Deep furrowing resulted in increased abundance of fungi and no ground preparation in increased abundance of bacteria in soil of 10−year−old Scots pine plantation. Increased abundance of fungi and bacteria was associated with increased abundance of taxa considered as antagonistic to Armillaria and Heterobasidion. Removal of the post−harvest wood debris and moderate or no mechanical intervention into the soil habitat on the clear−cut site before planting of Scots pine seedlings seems to create the habitat, which may be beneficial for the growth of young trees.
Źródło:
Sylwan; 2015, 159, 01; 71-81
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Bioróżnorodność grzybów igliwia sosny zwyczajnej porażonej przez jesienną osutkę sosny
Biodiversity of fungi community on Scots pine needles infected of the autumn needle cast
Autorzy:
Behnke-Borowczyk, J.
Powiązania:
https://bibliotekanauki.pl/articles/985795.pdf
Data publikacji:
2018
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
fitopatologia lesna
drzewa lesne
sosna zwyczajna
Pinus sylvestris
jesienna osutka sosny
igliwie sosnowe
grzyby zasiedlajace igly
roznorodnosc biologiczna
zbiorowiska grzybow
metody badan
system Illumina
Opis:
Needle casts belong to the fungal diseases of the assimilation apparatus, which affect the success and quality of the renewal of pine stands. The aim of this study was to investigate the diversity of communities of fungi, which occurred on Scots pine needles. Samples were collected in autumn 2015 from Scots pine saplings from Przedborów Forest District (17°58'34'E 51°31'57'N). Material was sequenced for DNA using Ilumina system. The results were compared with the NCBI base sequences. The results show significant dominance of fungi from Ascomycota division. The taxa responsible for the occurrence of Scots pine needle cast disease were also found. In this group, a significant share characterized the following species: Lophodermium pinastri, Cyclaneusma minus, Lophodermium seditiosum, Sydowia polyspora, Cenangium ferruginosum and Beauveria bassiana. The presented research should enhance the knowledge about the diversity of fungi inhabiting pine needles and about the contribution of pathogenic taxa, which can be used in a more efficient use of protective measures in forest management practice.
Źródło:
Sylwan; 2018, 162, 04; 288-294
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Zastosowanie regionu ITS1/2 rDNA i 18S rDNA do badania mykobioty gleby leśnej
Use of ITS1/2 rDNA and 18S rDNA in studies of the forest soil mycobiota
Autorzy:
Behnke-Borowczyk, J.
Kwaśna, H.
Powiązania:
https://bibliotekanauki.pl/articles/989532.pdf
Data publikacji:
2016
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
gleby lesne
mikroorganizmy glebowe
grzyby glebowe
struktura zbiorowisk
metody badan
metody molekularne
DNA rybosomalny
region ITS1/2
region 18S
detection
forest
its1/2 rdna
ns1
ns2
18s rdna
microorganisms
mycobiota
soil
Opis:
The aim of the studies was to check the usefulness of ITS1/2 rDNA and 18S rDNA regions in the molecular investigation of forest soil microbiota structure. Soil studied, originated from a 1−year−old plantation and a 40−year old stand of Scots pine located in Bierzwnik and Międzychów forest districts located 200 km apart. The hypothesis assumed that both approaches lead to the discovery of abundant microbiota communities with different structures and with rare common species. The environmental DNA was extracted with a Power Soil ® DNA Isolation Kit from two soil samples in each site. The ITS1/2 rDNA was amplified with specific primers ITS1 and ewfitsrev 1, and 18S rDNA with universal primers NS1 and NS2. PCR products were cloned into pGEM−T Easy. Inserts were primarily selected in blue/white screening on a X−gal medium. Representative clones were further selected in two separate RFLP analyses with HhaI and BsuRI restriction enzymes. Representative clones purified and sequenced using the Sanger Method in the DNA Research Centre (Poznań). Each sequence was identified to the lowest taxonomic rank. Ninety to 233 clones with DNA of 5−44 taxa including 3−37 taxa of fungi were obtained from 4 samples of soil. After application of ITS1/2 rDNA and 18S rDNA, the fungal DNA was detected respectively in 89,60−100,00% and 11,77−64,8% clones and the number of fungal species detected was respectively 12−37 and 3−19. Fungi were represented by four orders: Chytridiomycota, Zygomycota, Ascomycota and Basidiomycota. Both primers also amplified also DNA of other organisms (mostly from Animalia and Protista Kingdom) represented by 0−9 taxa. If compared, the application of forest soil microbiota structure with ITS1/2 rDNA and 18S rDNA led to detect a lower abundance of fungi and a bigger abundance of other organisms. Considering the higher number of clones and taxa recognized, the region of ITS1/2 rDNA was more effective in the studies of the soil microbiota structure. The region of 18S rDNA was efficient in local detection of Chytridiomycota and Zygomycota and of rare species of fungi from Ascomycota and Basidiomycota. Despite the deficiency of NCBI database the use of the 18S rDNA region in studies on fungal community the region should be included in molecular studies of fungal diversity. It is concluded that studies on the biodiversity of soil microorganisms need the application of a few independent methods of detection and identification.
Źródło:
Sylwan; 2016, 160, 07; 564-572
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Grzyby glebowe i ich znaczenie
Significance of the soil fungi
Autorzy:
Behnke-Borowczyk, J.
Kwaśna, H.
Powiązania:
https://bibliotekanauki.pl/articles/1009423.pdf
Data publikacji:
2010
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
gleby
mikrobiologia gleb
grzyby glebowe
funkcje biologiczne
fungi
soil
Opis:
Fungi in soil perform important services related to nutrient cycling, water dynamics and disease suppression. Along with bacteria, they are important as decomposers in the soil food network. Fungi convert hard−to−digest organic material into forms that other organisms can use. They can immobilize or retain nutrients in the soil. Secondary fungal metabolites have the fungistatic properties and are used in biocontrol processes. The hyphae physically binds soil particles together, creating stable aggregates that help increase water infiltration and soil water retention capacity. Fungi help to increase the accumulation of humic−acid rich organic matter that is resistant to degradation and may stay in the soil for hundreds of year.
Źródło:
Sylwan; 2010, 154, 12; 846-850
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Wpływ metodyki badań na ocenę struktury zbiorowisk mikroorganizmów w glebie leśnej
Effect of the methodology of studies on the structure of the microorganisms communities in the forest soil
Autorzy:
Behnke-Borowczyk, J.
Kwaśna, H.
Powiązania:
https://bibliotekanauki.pl/articles/989286.pdf
Data publikacji:
2016
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
gleby lesne
mikroorganizmy glebowe
grzyby mikroskopowe
struktura zbiorowisk
metodyka badan
metody klasyczne
metody molekularne
startery NS1
startery NS2
DNA
region 18S
classical method of isolation
fungi
microorganisms
ns1
ns2
18s rdna
soil
Opis:
Two different communities of microorganisms were identified in soils by application of the classical method of fungi isolation (soil dilution, culturing on artificial media, morphotyping) and a molecular method (extraction of the environmental DNA, amplification with universal primers NS1 and NS2, cloning and sequencing of representative clones). No organisms were common to both communities. Apart from rare representatives of the Animalia, communities included single fungus−like Eucarya belonging to the Protista, Class Oomycota, and numerous fungi belonging to Chytridiomycota, Zygomycota, Ascomycota and Basidiomycota orders. In total, 88 species were identified in four soil samples. Fungi were mostly Ascomycota. The classical method was particularly effective in detection of fungi important for creation of phytosanitary conditions of soil, i.e. antagonists (Penicillium, Tolypocladium and Trichoderma) and potential stimulants (dark−pigmented Hormiactis candida, Humicola spp. and Phialophora spp.) of phytopathogens (including the common forest genera Armillaria and Heterobasidion). Application of the classical method allowed the detection of mycorrhizal Ascomycota from the genus Oidiodendron. Application of the molecular method allowed the detection of 13 mycorrhizal Basidiomycota. Although primers NS1 and NS2 were designed from a match with DNA of culturable organisms, they also amplified the DNA of non−culturable organisms. This emphasizes their potential usefulness in studies of the biodiversity of microorganisms in environmental samples. The shortage of reference sequences in the database discourages use of the 18S rDNA region in studies on fungal communities. The studies on the biodiversity of microorganisms need the application of a few independent methods of detection and identification.
Źródło:
Sylwan; 2016, 160, 06; 492-503
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Goidanichiella sphaerospora, the worlds second record
Goidanichiella sphaerospora, drugie stanowisko na świecie
Autorzy:
Kwasna, H.
Behnke-Borowczyk, J.
Powiązania:
https://bibliotekanauki.pl/articles/66920.pdf
Data publikacji:
2010
Wydawca:
Polskie Towarzystwo Botaniczne
Opis:
Aspecimen of Goidanichiella sphaerospora was found in Pinus sylvestris forest soil in Międzychód, northwestern Poland (52.601, 15.889883), in October 2009. This is the world’s second record of G. sphaerospora. Bimorphic conidial heads and conidia are reported for the first time. Goidanichiella sphaerospora forms Aspergillus- and Penicillium-like conidial heads. Conidia formed at +24oC are oval to ellipsoidal, often apiculate, smooth, rather thick-walled, hyaline, with one oil drop inside, 3-4 × 2-3 μm. Additional ellipsoidal to cylindrical, thin-walled, 4-6.5 (-8) × 2-3.0 μm conidia are formed only after incubation for at least 7 days at +4oC in darkness.
Goidanichiella sphaerospora znaleziono w glebie leśnej, w młodniku Pinus sylvestris, w Międzychodzie (Polska północna, 52.601, 15.889883), w październiku 2009. Jest to drugie stanowisko tego grzyba na świecie. Poprzednio grzyba stwierdzono w glebie leśnej w Japonii. Grzyb tworzy zarodniki konidialne na bimorficznych konidioforach przypominających konidiofory Aspergillus i Penicillium. Wystepują dwa rodzaje zarodników. W temperaturze 24oC, na PDA i SNA , tworzą się konidia, które są owalne do eliptycznych, ostro zakończone u podstawy, gładkie, grubościenne, hialinowe, z jedną kroplą wewnątrz, 3-4 × 2-3 μm. W temperaturze 4oC, przy braku światła, tworzą się dodatkowe konidia, które są eliptyczne do cylindrycznych, cienkościenne, 4-6,5 (-8) × 2-3,0 μm.
Źródło:
Acta Mycologica; 2010, 45, 1
0001-625X
2353-074X
Pojawia się w:
Acta Mycologica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Gatunki Phytophthora i Pythium w glebie i w korzeniach dębu szypułkowego na terenach popowodziowych w Nadleśnictwie Wołów
Phytophthora and Pythium species in soils and in roots of the pedunculate oaks in periodically flooded areas in Wolow Forest District
Autorzy:
Kwaśna, H.
Szewczyk, W.
Behnke-Borowczyk, J.
Powiązania:
https://bibliotekanauki.pl/articles/989782.pdf
Data publikacji:
2015
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
tereny pokleskowe
tereny popowodziowe
drzewostany debowe
drzewa lesne
dab szypulkowy
Quercus robur
korzenie
gleby lesne
grzyby
Phytophthora
Phytium
wystepowanie
Nadlesnictwo Wolow
pedunculate oak
fungi
globisporangium
oomycota
flood
phytophthora
pythium
Opis:
Phytophthora and Pythium species (Oomycota) are known to be serious pathogens of forest trees. Little is known, however, about their presence in Polish oak forests and their role in the oak decline, especially in the flooded areas. The aim of this study was (1) to detect and compare populations of microorganisms from Oomycota and fungi in roots and soil of healthy and declining pedunculate 30−126 years old oak stands, which had been flooded by the Odra River for three months in 1997 and one month in 2010, (2) to demonstrate the relationship between different chemical factors of soil and the occurrence of microorganisms, and (3) to assess the contribution of Oomycota to oak decline. Study was carried out in Wołów Forest District (south−western Poland). Microorganisms were isolated from fine (1−5 mm in diameter) roots and non−rhizosphere soil collected from 0−50 cm horizon. Isolation procedure from roots included surface sterilization and plating the root segments on the nutrient agar. An oak leaf baiting method was used for isolation of Oomycota from soil. Identification of microorganisms was based on morphology and sequencing of the ITS1/2 rDNA. Oomycota was represented by: Globisporangium, Phytophthora and Pythium and fungi mostly by: Aspergillus, Chaetosphaeria, Cylindrocarpon, Mortierella, Mucor, Penicillium, Trichoderma and Umbelopsis. Globisporangium attrantheridium (syn. Pythium attrantheridium) occurred locally and was found in roots of only one flooded oak. This is the first record of this species on oak and in Poland. G. intermedium, P. gibbosa/P. gregata, P. plurivora and Pythium sp. were found in soil of flooded and non−flooded (control) oak stands. The organisms occurred in podzolized brown soils, brown alluvial soils and gley soils that had most nitrogen (21−60 mg/kg), various amounts of calcium (61.1−347.6 mg/100g) and moderate acidity (pH=3.85−4.2). There was often a significant association between exposure to flood and the health status of oak trees assessed by the scale of defoliation. Oomycota seemed to be only moderately associated with increased tree defoliation as a symptom of oak decline.
Źródło:
Sylwan; 2015, 159, 07; 531-539
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Populations of Armillaria species in pine plantations in west-central Poland
Autorzy:
Szewczyk, W.
Kwasna, H.
Behnke-Borowczyk, J.
Powiązania:
https://bibliotekanauki.pl/articles/41760.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Instytut Dendrologii PAN
Opis:
Two diploid isolates of Armillaria gallica and 143 diploid isolates of A. solidipes were obtained from 145 samples of rhizomorphs, fruit bodies and infected wood of sessile oak and Scots pines from 5–10-year-old Scots pine plantations in three Forest Districts located 100–350 km apart in west-central Poland. Based on pairings among the 145 isolates, 18 somatic compatibility groups (genets) of A. solidipes were distinguished in the three plantations. Sequencing of ITS1/2 rDNA of 18 isolates representing the 18 genets delineated four nuclear haplotypes. This suggests that many of the A. solidipes genets are closely related and were possibly established by sib-related basidiospores. With a few exceptions there was general geographical specialization of genets but not haplotypes. Geographical specialization of genets and the dominance of single haplotypes suggest that the A. solidipes population results from clonal rather than sexual reproduction. Sequencing of the ITS1/2 and IGS-1 rDNA showed small nucleotide diversity in ITS1/2 rDNA and much more diversity in IGS-1 rDNA of the isolates of A. solidipes studied. However, none of these regions has sufficient resolution for the clear differentiation of A. solidipes from A. borealis. The sequences of the EF 1-alpha gene showed high interspecific variability in Armillaria species and very low intraspecific variability in A. solidipes. This gene is the most appropriate for reliable identification of biological species and subgroups of Armillaria. Its application is the most useful in ecological and epidemiological studies of Armillaria.
Źródło:
Dendrobiology; 2015, 74
1641-1307
Pojawia się w:
Dendrobiology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Metody molekularne stosowane w badaniu różnorodności mikroorganizmów glebowych
Molecular methods used in studies of diversity of the soil microorganisms
Autorzy:
Behnke-Borowczyk, J.
Kwaśna, H.
Belka, M.
Powiązania:
https://bibliotekanauki.pl/articles/1006468.pdf
Data publikacji:
2012
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
mikroorganizmy glebowe
identyfikacja
roznorodnosc biologiczna
metody badan
metody molekularne
ekstrakcja DNA
amplifikacja DNA
biodiversity
microbiota
molecular methods
soil
Opis:
Application of the correct methods of study is essential for a proper description and understanding of natural communities of microorganisms and their relationships. Classical methods used for detection and identification of soil microorganisms resulted in underestimation of the microbiota. It has been claimed that classical methods, based mainly on morphology, led to the identification of only 1% of the soil microbiota, usually species that predominate in culture because of their fast growth and abundant sporulation. Molecular methods allow rapid, accurate, sensitive and cost−effective identification and enumeration of microorganisms. They are designed to replace and/or support classical approaches. This review summarizes some of the current and emerging nucleic acid−based molecular approaches used for detection, discrimination and quantification of microbes in the environment, mostly in soil.
Źródło:
Sylwan; 2012, 156, 04; 294-304
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Mykobiota krzewów jałowca Juniperus x media z objawami zamierania na terenie oczyszczalni ścieków w Poznaniu
Mycobiota of juniper Juniperus x media with symptoms of dieback in sewage plant facilities area in Poznan
Autorzy:
Behnke-Borowczyk, J.
Kwaśna, H.
Szewczyk, W.
Zatorski, J.
Powiązania:
https://bibliotekanauki.pl/articles/1291988.pdf
Data publikacji:
2019
Wydawca:
Instytut Badawczy Leśnictwa
Tematy:
fitopatologia
zamieranie pedow
jalowiec posredni
Juniperus media
patogeny
grzyby
Chalara
Cytospora
Fusarium
Ilyonectria
Mycosphaerella
Pestalotiopsis
Setomelanomma
Armillaria
Rhizoctonia
Thelephora
Cadophora
Leptosphaeria
Lophodermium
Septoria
Sydowia
gałęzie
zamieranie
jałowiec
branches
dieback
fungi
juniper
pathogens
Opis:
The frequency and diversity of fungi in branches, roots and soil was examined in 3–10-years-old diseased Juniperus x media trees growing in the surroundings of the sewage treatment facility in Poznań. Symptoms of branch dieback appeared first on the older parts inside the crown and mostly in the lower part of trees subsequently spreading upwards and outwards. Our analyses included extraction of environmental rDNA from branches, roots and soil, amplification of the rDNA with fungi specific primers and sequencing. Fungal taxa from Ascomycota, Basidiomycota, Chytridiomycota, Glomeromycota and Zygomycota were detected with a total of 695, 135 and 196 taxa in branches, roots and soil, respectively. Fungal communities included plant pathogens, opportunistic pathogens, epiphytes or endophytes, mycorrhizal taxa, saprotrophs common on organic debris and in soil, human and animal pathogens, entomopathogenic taxa, mycoparasites, white and black yeasts, taxa with antagonistic and medicinal properties and lichenized fungi. The frequency of potential plant pathogens was 2.64–33.12% in branches, 0.88% in roots and 1.29–2.93% in soil. The most common pathogens were species from Chalara, Cytospora, Fusarium, Ilyonectria, Mycosphaerella, Setomelanomma (Ascomycota) and Armillaria, Rhizoctonia (Basidiomycota) genera. The less frequent pathogens included species from Leptosphaeria, Lophodermium and Septoria genera. In conclusion, oxygen deficiency and the presence of poisonous gases in the air around the sewage plant is likely to have had damaging effects on plants infected or colonized by opportunistic and facultative parasites.
Źródło:
Leśne Prace Badawcze; 2019, 80, 4
1732-9442
2082-8926
Pojawia się w:
Leśne Prace Badawcze
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Zastosowanie technik biologii molekularnej do detekcji Erysiphe alphitoides (Griffon & Maubl.) U. Braun and S. Takam. w organach roślinnych
Applying the molecular biology techniques to the detection of Erysiphe alphitoides (Griffon & Maubl.) U. Braun and S. Takam. in plant parts
Autorzy:
Roszak, R.
Baranowska, M.
Belka, M.
Behnke-Borowczyk, J.
Powiązania:
https://bibliotekanauki.pl/articles/979672.pdf
Data publikacji:
2019
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
drzewa lesne
dab
Quercus
paki
liscie
pedy
maczniak prawdziwy debu
Erysiphe alphitoides
wykrywanie
techniki biologii molekularnej
oak powdery mildew
sessile oak
overwintering
fungal diseases
its
Opis:
Erysiphe alphitoides causes the most common disease of assimilation apparatus of oaks of different age. It is believed that the pathogen overwinters in buds of the host plant or in the cracks of the bark. The aim of the study was to search for the presence of E. alphitoides in buds, leaves, and wood of sessile oak shoots using molecular techniques. Two hypotheses have been tested: (i) oaks are infected by E. alphitoides, and (ii) the pathogen overwinters in the host plant buds. The samples used in the study were collected form sessile oak trees (Miradz Forest District; 52°41'23.197'N, 18°25'33.942'E) in 2017, and consisted of dormant buds (collected in May), young leaves (collected in June), leaves with visible symptoms of the disease (collected in August), shoot with sip and surface layers of wood (collected in December). Additional part of buds was collected in May 2018. The PCR reaction was carried out with primers specific for E. alphitoides and E. hypophylla. For species identification Sanger method was used. The resulting sequences were compared using BLAST algorithm with reference sequences deposited in the NCBI database. Sequences from isolates obtained from leaves showed 97−99% similarity to the reference sequence of E. alphitoides. Pathogen did not occur in the superficial layers of shoots and buds. As some studies show, at very low temperatures (below –20°C), the mycelium of the pathogen dies, therefore further study should be undertaken on wintering of the pathogen causing the powdery mildew disease on oaks. It also should be examined whether the pathogen overwinters in the form of bagnial spores produced in chasmothecia overwintering on leaves, in the leaf buds, or in bark cracks, and whether the wintering site of the pathogen is related to the age of trees and or to the stands where the trees grow.
Źródło:
Sylwan; 2019, 163, 09; 740-745
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Pory roku a zbiorowisko grzybów zasiedlających pniaki czeremchy amerykańskiej
Seasonal changes in fungi colonies inhabiting black cherry stumps
Autorzy:
Baranowska, M.
Korzeniewicz, R.
Kartawik, N.
Behnke-Borowczyk, J.
Powiązania:
https://bibliotekanauki.pl/articles/979585.pdf
Data publikacji:
2019
Wydawca:
Polskie Towarzystwo Leśne
Tematy:
lesnictwo
drzewa lesne
gatunki inwazyjne
czeremcha amerykanska
Prunus serotina
fitopatologia
pniaki czeremchy
grzyby zasiedlajace drewno
grzyby mikroskopowe
identyfikacja
system Illumina
pory roku
illumina system
invasive species
dead wood
saprotrophs
wood−decay fungus
Opis:
Black cherry is an important invasive species in forest ecosystems in Poland. It developed mainly in Scots pine stands. The aim of the study was to identify microscopic fungi colonies inhabiting black cherry stumps. In the spring of 2017, wood samples were collected from stumps created after cutting in each subsequent month of 2016 in the Podanin Forest District (19°28'00'E, 52°04'00'N). Stumps up to 5 cm and more than 5 cm in diameter were selected for the study. In total, 72 discs from the first stage of the decomposition of wood were collected. The discs were drilled to obtain fine sawdust for further analysis. The trials were divided into four periods. DNA isolation was performed using the Plant Genomic DNA purification kit (ThermoScientific). The ITS1/2 rDNA region was used for species identification. The analysis was carried out using specific primers. The obtained product was purified and sequenced using the Illumina SBS technology. The resulting sequence was compared using the BLAST algorithm with reference sequences from the NCBI database. The communities of fungi inhabiting the black cherry stumps differed from each other. The highest number of taxa was identified in samples from stumps over 5 cm sheared in autumn and winter, while the lowest in stumps up to 5 cm sheared in spring and winter. Fungi belonging to the Ascomycota and Basidiomycota, Blastocladiomycota, Glomeromycota, Zygomycota and non−cultivable fungi and organisms belonging to other kingdoms were identified. Saprophytes from Menispora sp. dominated on the analysed stumps. The collection of fungi of larger stumps was more diverse and more numerous than on stumps with a smaller diameter. A greater diversity of taxa was distinguished by the stumps of tree fallen in the growing season. The majority of the analyzed samples were dominated by Ascomycota. Basidiomycota clusters dominated in the winter. The predominant share of saprotrophs shows the distribution of stumps. The most desirable effect of the research would be the indication of naturally occurring saprotroph, whose operation would reduce the black cherry’s yield strength. The applied method of sequencing based on the Illumina System was effective to determine the composition of the fungal population.
Źródło:
Sylwan; 2019, 163, 10; 872-880
0039-7660
Pojawia się w:
Sylwan
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Abundance and diversity of fungi in oak wood
Autorzy:
Behnke-Borowczyk, J.
Kwasna, H.
Kokot, K.
Haluszczak, M.
Lakomy, P.
Powiązania:
https://bibliotekanauki.pl/articles/2077912.pdf
Data publikacji:
2018
Wydawca:
Polska Akademia Nauk. Instytut Dendrologii PAN
Tematy:
abundance
deadwood
diversity
fungi
ITS
Illumina
oak
Opis:
Deadwood is an important functional and structural component of forest ecosystems since it regulates nutrient cycling, serves as a carbon (C) pool, increases the C content in the soil, and is a source of resources, including water, for a wide range of saproxylic and non-saproxylic organisms. The abundance and diversity of wood-inhabiting fungi in six fallen, horizontally lying logs of Quercus petraea, in the 1st, 2nd and 3rd decay classes, in the Drawa National Park in Poland in 2015, were studied using the Illumina se- quencing technique. The total number of OTUs obtained (264 307) included sequences of culturable fungi (242 369 = 91.70%) and non-culturable fungi (7 056 = 2.66%). The dead oak wood was colonized by 277 taxa. Culturable fungi of Zygomycota, Ascomycota and Basidiomycota comprised 75% of taxa detected and were represented by 14, 139 and 53 taxa respectively. Non-culturable organisms were represented by 70 taxa. Fungi were classified into 18 groups: (i) typical soft rot fungi, (ii) phytopathogens potentially hazard- ous to trees, (iii) epiphytes and endophytes or weak, opportunistic pathogens, (iv) ectomycorrhizal species, (v) ericoid mycorrhizal species, (vi) crust fungi, (vii) resupinate basidiomycetes, (viii) saprotrophs and soil fungi, (ix) opportunistic human pathogens causing superficial or systemic mycoses, (x) pathogens of warm- or cold-blooded animals, (xi) ascomycetous yeasts, (xii) basidiomycetous yeasts, (xiii) antagonists of fungi, (xiv) producers of metabolites effective against pathogens, (xv) hyperparasites, (xvi) lichen-form- ing species, (xvii) partners of other fungi, (xviii) species rare or uncommon in nature. It was shown that: (i) coarse, woody debris of oak is host to abundant and diverse mycobiota, (ii) abundance and diversity of fungi increase with the decay continuum, (iii) oak logs can be a habitat of phytopathogens potentially haz- ardous to forest health, (iv) different phytopathogens favour wood in different decay classes, (v) abundance of pathogens decreases, and of ericoid mycorrhizal (or soil) species increases with the decay continuum. Maintaining different types of deadwood increases fungal diversity, but also the risk of diseases.
Źródło:
Dendrobiology; 2018, 80; 143-160
1641-1307
Pojawia się w:
Dendrobiology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Zastosowanie metod biologii molekularnej do identyfikacji grzybów zasiedlających martwe drewno sosny zwyczajnej (Pinus sylvestris L.)
Application of molecular biology methods to indentify fungi inhabiting dead wood of Scots pine (Pinus sylvestris L.)
Autorzy:
Behnke-Borowczyk, J.
Cichon, J.
Wolowska, D.
Haluszczak, M.
Baranowska-Wasilewska, M.
Powiązania:
https://bibliotekanauki.pl/articles/791463.pdf
Data publikacji:
2017
Wydawca:
Wyższa Szkoła Zarządzania Środowiskiem w Tucholi
Tematy:
roznorodnosc biologiczna
grzyby zasiedlajace drewno
drewno martwe
identyfikacja
biologia molekularna
zbiorowiska grzybow
sklad gatunkowy
molecular biology
application
identification method
fungi
colonizing fungi
species composition
wood
dead wood
Scotch pine
Pinus sylvestris
fungi community
Źródło:
Zarządzanie Ochroną Przyrody w Lasach; 2017, 11
2081-1438
2391-4106
Pojawia się w:
Zarządzanie Ochroną Przyrody w Lasach
Dostawca treści:
Biblioteka Nauki
Artykuł
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