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Wyszukujesz frazę "methylation" wg kryterium: Temat


Tytuł:
A comparison of the in vitro genotoxicity of anticancer drugs idarubicin and mitoxantrone.
Autorzy:
Błasiak, Janusz
Gloc, Ewa
Warszawski, Mariusz
Powiązania:
https://bibliotekanauki.pl/articles/1043821.pdf
Data publikacji:
2002
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
mitoxantrone
oxidative DNA damage
DNA damage
idarubicin
comet assay
DNA methylation
DNA repair
Opis:
Idarubicin is an anthracycline antibiotic used in cancer therapy. Mitoxantrone is an anthracycline analog with presumed better antineoplastic activity and lesser toxicity. Using the alkaline comet assay we showed that the drugs at 0.01-10 μM induced DNA damage in normal human lymphocytes. The effect induced by idarubicin was more pronounced than by mitoxantrone (P < 0.001). The cells treated with mitoxantrone at 1 μM were able to repair damage to their DNA within a 30-min incubation, whereas the lymphocytes exposed to idarubicin needed 180 min. Since anthracyclines are known to produce free radicals, we checked whether reactive oxygen species might be involved in the observed DNA damage. Catalase, an enzyme inactivating hydrogen peroxide, decreased the extent of DNA damage induced by idarubicin, but did not affect the extent evoked by mitoxantrone. Lymphocytes exposed to the drugs and treated with endonuclease III or formamidopyrimidine-DNA glycosylase (Fpg), enzymes recognizing and nicking oxidized bases, displayed a higher level of DNA damage than the untreated ones. 3-Methyladenine-DNA glycosylase II (AlkA), an enzyme recognizing and nicking mainly methylated bases in DNA, increased the extent of DNA damage caused by idarubicin, but not that induced by mitoxantrone. Our results indicate that the induction of secondary malignancies should be taken into account as side effects of the two drugs. Direct strand breaks, oxidation and methylation of the DNA bases can underlie the DNA-damaging effect of idarubicin, whereas mitoxantrone can induce strand breaks and modification of the bases, including oxidation. The observed in normal lymphocytes much lesser genotoxicity of mitoxantrone compared to idarubicin should be taken into account in planning chemotherapeutic strategies.
Źródło:
Acta Biochimica Polonica; 2002, 49, 1; 145-155
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
A stable density approach to probe selection for a custom aCGH design
Autorzy:
Gambin, T.
Stankiewicz, P.
Gambin, A.
Powiązania:
https://bibliotekanauki.pl/articles/81185.pdf
Data publikacji:
2011
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
genomic region
probe
copy number alternation
comparative genomic hybridization
human genome
microarray
wide range application
gene expression
methylation
binding protein
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2011, 92, 3
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Ancient history of X-ray crystal structure of B-DNA oligomers and its perspective
Autorzy:
Grzeskowiak, K.
Ohishi, H.
Powiązania:
https://bibliotekanauki.pl/articles/80367.pdf
Data publikacji:
2011
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
ancient history
X-ray crystallography
crystal structure
DNA oligomer
DNA binding protein
DNA binding drug
nanotechnology
methylation
nanotube
antitumour agent
DNA restriction
DNA sequence
protein
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2011, 92, 3
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Brachypodium distachyon – a model plant to study grass genome structure, dynamics and evolution
Autorzy:
Idziak, D.
Hasterok, R.
Betekhtin, A.
Borowska-Zuchowska, N.
Braszewska-Zalewska, A.
Chwialkowska, K.
Gorkiewicz, R.
Kus, A.
Kwasniewska, J.
Kwasniewski, M.
Robaszkiewicz, E.
Siwinska, D.
Wolny, E.
Chrominski, K.
Tkacz, M.
Powiązania:
https://bibliotekanauki.pl/articles/951271.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
Brachypodium distachyon
model plant
grass
genome structure
Expressed Sequence Tag programme
fluorescent in situ hybridization
chromosome painting
DNA methylation
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2015, 96, 1
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Changes in distribution of 5 methylcytosine in male and female gametophyte of Hyacinthus orientalis before and after fertilization
Autorzy:
Kozlowska, M.
Niedojadlo, K.
Bednarska-Kozakiewicz, E.
Powiązania:
https://bibliotekanauki.pl/articles/80166.pdf
Data publikacji:
2013
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
conference
gene activity
chromatin structure
5-methylcytosine
female gametophyte
male gametophyte
seed development
flowering plant
Hyacinthus orientalis
fertilization
transcriptional activity
epigenetic factor
DNA methylation
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2013, 94, 3
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Changes in DNA methylation in maize under herbicide stress conditions
Autorzy:
Tyczewska, A.
Gracz, J.
Szymkowiak, J.
Twardowski, T.
Powiązania:
https://bibliotekanauki.pl/articles/951318.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
DNA methylation
chromatin modification
gene silencing
gene transcription
maize
herbicide stress
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2015, 96, 1
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Changes in DNA methylation of embryonic axes of seeds of oak and beech during in vitro culture and cryopreservation
Autorzy:
Nuc, K.
Marszalek, M.
Pukacki, P.M.
Powiązania:
https://bibliotekanauki.pl/articles/80269.pdf
Data publikacji:
2013
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
conference
DNA methylation
plant growing
embryonic axis
seed
oak
beech
in vitro culture
cryopreservation
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2013, 94, 3
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Changes of DNA methylation and hydroxymethylation in plant protoplast cultures
Autorzy:
Moricová, Pavla
Ondřej, Vladan
Navrátilová, Božena
Luhová, Lenka
Powiązania:
https://bibliotekanauki.pl/articles/1039600.pdf
Data publikacji:
2013
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
Brassica oleracea
DNA hydroxymethylation
Cucumis sativus
protoplasts
DNA methylation
Opis:
Cytosine methylation patterns in higher eukaryotes are important in gene regulation. Along with 5-methylcytosine (5-mC), a newly discovered constituent of mammalian DNA, 5-hydroxymethylcytosine (5-hmC), is the other modified base in higher organisms. In this study we detected 5-hmC in plant protoplast DNA and demonstrated its increasing content during the first 72 hrs. of protoplast cultivation. In contrast to 5-hmC, the amount of 5-mC decreased during protoplast cultivation. It was also found that 5-hmC did not primarily arise as a product of oxidative DNA damage following protoplast culture.
Źródło:
Acta Biochimica Polonica; 2013, 60, 1; 33-36
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Comparative analysis of CpG islands in two genotypes of African swine fever virus
Autorzy:
Yu, Y.-Y.
X, M.-S.
Liu, Q.
Powiązania:
https://bibliotekanauki.pl/articles/16539329.pdf
Data publikacji:
2022
Wydawca:
Polska Akademia Nauk. Czasopisma i Monografie PAN
Tematy:
African Swine Fever Virus (ASFV)
genotype
DNA methylation
CpG island
Opis:
African swine fever (ASF) is an acute, hemorrhagic, and devastating viral infectious disease that causes important economic losses to the swine industry. Currently, there are no effective vaccines or drugs available. Epigenetic mechanisms, especially cytosine methylation of cytosine-phosphate-guanine (CpG) islands, have a significant impact on the life cycle of several viruses. Hence, drugs targeting DNA methylation may potentially be used for the treatment of ASF. Here, we selected the inner core, core shell, inner membrane, capsid, and external envelope membrane, to analyze the characteristics of CpG islands in the ASF virus (ASFV) genomes. Furthermore, we analyzed the promoters and CpG islands in the upstream regions of these genes. Results showed that the CpG islands of seven genes were conserved in the genomes of two genotype of ASFV strains, whereas the CpG islands of other genes were relatively conserved (ASFV strains differed mainly in the quantity of CpG islands). The different distribution of CpG islands in the genomes of different ASFV strains may affect their methylation status, which may in turn affect the regulation of viral gene expression, leading to different clinical outcomes. In addition, the predicted promoter regions based on the upstream sequences of most genes overlapped with CpG island positions. Methylation of the binding sites of the promoter regions inhibits the binding of the transcription factors to the promoters, thus inhibiting the activation of the promoters and limiting the synthesis of viral proteins. The results of this study provide a basis for exploring new antiviral therapeutic strategies from an epigenetic perspective.
Źródło:
Polish Journal of Veterinary Sciences; 2022, 25, 3; 455-462
1505-1773
Pojawia się w:
Polish Journal of Veterinary Sciences
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Comparative study on tissue culture induced variation identified with metAFLP and RP – HPLC in barley and triticale regenerants
Autorzy:
Machczynska, J.
Orlowska, R.
Ogorek, K.A.
Bednarek, P.T.
Powiązania:
https://bibliotekanauki.pl/articles/951298.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
tissue culture
in vitro culture
plant regeneration
genetic change
DNA methylation
histone modification
high performance liquid chromatography
barley
triticale
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2015, 96, 1
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Comparison of epigenetic changes induced by particular phytohormones and oligonucleotide sequences in flax
Autorzy:
Dzialo, M.
Zuk, M.
Szopa-Skorkowski, J.
Powiązania:
https://bibliotekanauki.pl/articles/951289.pdf
Data publikacji:
2015
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
conference
epigenetic change
phytohormone
oligonucleotide
flax
Linum usitatissimum
DNA sequence
methylation
flavonoids
chalcone synthase
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2015, 96, 1
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Correlation of chromosome damage and promoter methylation status of the DNA repair genes MGMT and hMLH1 in Chinese vinyl chloride monomer (VCM)-exposed workers
Autorzy:
Wu, Fen
Liu, Jing
Qiu, Yu-Lan
Wang, Wei
Zhu, Shou-Min
Sun, Pin
Miao, Wen-Bin
Li, Yong-Liang
Brandt-Rauf, Paul W.
Xia, Zhao-Lin
Powiązania:
https://bibliotekanauki.pl/articles/2179802.pdf
Data publikacji:
2013-03-01
Wydawca:
Instytut Medycyny Pracy im. prof. dra Jerzego Nofera w Łodzi
Tematy:
vinyl chloride monomer
chromosome damage
MGMT
hMLH1
DNA methylation
Opis:
Objective: To explore the association of the methylation status of MGMT and hMLH1 with chromosome damage induced by vinyl chloride monomer (VCM). Materials and Methods: Methylation of MGMT and hMLH1 was measured in 101 VCM-exposed workers by methylation-specifi c PCR. Chromosome damage in peripheral blood lymphocytes was measured by the cytokinesis-block micronucleus assay. The subjects were divided into chromosome damaged and non-damaged groups based on the normal reference value of micronuclei frequencies determined for two control groups. Results: MGMT promoter methylation was detectable in 5 out of 49 chromosome damaged subjects, but not in the chromosome non-damaged subjects; there was a signifi cant difference in MGMT methylation between the two groups (p < 0.05). Conclusions: We detected aberrant promoter methylation of MGMT in a small number of chromosome damaged VCM-exposed workers, but not in the chromosome non-damaged subjects. This preliminary observation warrants further investigation in a larger study.
Źródło:
International Journal of Occupational Medicine and Environmental Health; 2013, 26, 1; 173-182
1232-1087
1896-494X
Pojawia się w:
International Journal of Occupational Medicine and Environmental Health
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Detection of C677T & A1298C mutations within the MTHFR gene by PCR and RFLP assays and assessment of risk factor of Hyperhomocysteinemia
Autorzy:
Amarakoon, A. A. D. Gayathri Upeksha
Fernandopulle, Neil
Powiązania:
https://bibliotekanauki.pl/articles/1182887.pdf
Data publikacji:
2016
Wydawca:
Przedsiębiorstwo Wydawnictw Naukowych Darwin / Scientific Publishing House DARWIN
Tematy:
mthfr gene
dna methylation
hyperhomocysteinemia
Opis:
The MTHFR gene within the human genome, codes for the synthesis of Methylenetetrahydrofolate Reductase enzyme, which reduces 5,10-Methylenetetrahydrofolate to 5-Methyltetrahydrofolate, which in turn, is the major circulatory form of folate in the blood. Folate, in this form, among it’s other functions, is involved in reducing the homocysteine levels in the blood, whose elevated levels lead to Hyperhomocysteinemia, causing various major disorders. Mutations within the gene lead to impairment of gene function, in turn causing the homocysteine levels to rise. The C677T and A1298C mutations are the main causative agents for MTHFR gene disruption. During the course of the project, a total of 79 samples were analyzed for the presence of these mutations. The blood samples were first subjected to PCR, giving two separate DNA fragments each responsible for either of the conditions. The fragments were then subjected to RFLP analysis to detect the mutations. The results were finally given with respect to the risk factor faced by each individual based on a molecular diagnostic point of view.
Źródło:
World Scientific News; 2016, 53, 3; 253-274
2392-2192
Pojawia się w:
World Scientific News
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
DNA methylation dynamics under drought stress in barley
Autorzy:
Chwialkowska, K.
Szarejko, I.
Kwasniewski, M.
Powiązania:
https://bibliotekanauki.pl/articles/81198.pdf
Data publikacji:
2013
Wydawca:
Polska Akademia Nauk. Czytelnia Czasopism PAN
Tematy:
conference
DNA methylation
gene expression
Hordeum vulgare
drought stress
spring barley
cytosine methylation
Źródło:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology; 2013, 94, 3
0860-7796
Pojawia się w:
BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Effect of temperature on o-cresol methylation in a fluidized bed of commercial iron-chromium catalyst TZC-3/1
Autorzy:
Berkowicz, G.
Żukowski, W.
Baron, J.
Powiązania:
https://bibliotekanauki.pl/articles/778096.pdf
Data publikacji:
2013
Wydawca:
Zachodniopomorski Uniwersytet Technologiczny w Szczecinie. Wydawnictwo Uczelniane ZUT w Szczecinie
Tematy:
2,6-dimethylphenol
o-cresol methylation
iron-chromium catalyst TZC-3/1
fluidized bed
Opis:
The paper presents the results of the synthesis of 2,6-dimetyhlphenol (26DMP) from o-cresol. The target compound is an important substrate for polymer chemistry. Due to a large amount of o-cresol which is generated as a by-product, during the synthesis of 2,6-dimethylphenol from phenol, the methylation of o-cresol to 2,6-dimethylphenol should be examined as a separate process. The alkylation of o-cresol was carried out in a fluidized bed of commercial iron-chromium catalyst TZC-3/1. Undesirable decomposition of methyl alcohol on the catalyst generates a number of environmentally dangerous by-products such as methane, carbon dioxide, carbon monoxide. The effect of temperature on the yield of the synthesis was investigated. The synthesis process was monitored on-line in the temperature range 310-380°C, completely covering the maximum efficiency of the process. Online analysis of the process by FTIR spectroscopy gave information about products of both methylation of o-cresol and pyrolysis of methanol. The maximum 85% yield of desired 2,6-dimethylphenol with more than 85% conversion of o-cresol was achieved at 340°C, at 1:6 molar ratio of o-cresol:methanol.
Źródło:
Polish Journal of Chemical Technology; 2013, 15, 3; 100-102
1509-8117
1899-4741
Pojawia się w:
Polish Journal of Chemical Technology
Dostawca treści:
Biblioteka Nauki
Artykuł

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