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Wyszukujesz frazę "genetic semihomology algorithm" wg kryterium: Wszystkie pola


Wyświetlanie 1-2 z 2
Tytuł:
Application of genetic semihomology algorithm to theoretical studies on various protein families.
Autorzy:
Leluk, Jacek
Hanus-Lorenz, Beata
Sikorski, Aleksander
Powiązania:
https://bibliotekanauki.pl/articles/1044159.pdf
Data publikacji:
2001
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
multiple alignment
cryptic mutations
genetic semihomology
sequence consensus
Opis:
Several protein families of different nature were studied for genetic relationship, correct alignment at non-homologous fragments, optimal sequence consensus construction, and confirmation of their actual relevance. A comparison of the genetic semihomology approach with statistical approaches indicates a high accuracy and cognition significance of the former. This is particularly pronounced in the study of related proteins that show a low degree of homology. The sequence multiple alignments were verified and corrected with respect to the questionable, non-homologous fragments. The verified alignments were the basis for consensus sequence formation. The frequency of six-codon amino acids occurrence versus position variability was studied and their possible role in amino acid mutational exchange at variable positions is discussed.
Źródło:
Acta Biochimica Polonica; 2001, 48, 1; 21-33
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Correlated mutations in selected protein families
Autorzy:
Leluk, J.
Sobczyk, M.
Becella, Ł.
Powiązania:
https://bibliotekanauki.pl/articles/1986920.pdf
Data publikacji:
2002
Wydawca:
Politechnika Gdańska
Tematy:
protein sequence
multiple alignment
tertiary structure
mutational correlation
genetic semihomology algorithm
Opis:
Four different protein families (two proteinase inhibitor families, myoglobins and lysozymes) were surveyed for correlated mutations with respect to the position distance and their significance in structure stabilization and biological activity. They were chosen for this study in order to verify the currently admitted model of mutational correlation relationship with respect to spatial contact of the residues and contribution in protein biological activity. There was observed high contribution of spatially dispersed residues (which are also not involved in the protein active center) in mutational correlation. Because of the significantly large distance between correlated positions these cases do not correspond explicitly to any mechanism included in current hypotheses. It is suggested that the role of residue spatial contact in structure preservation, intermolecular interaction and active site rescue mechanisms only partially explains the correlation phenomenon.
Źródło:
TASK Quarterly. Scientific Bulletin of Academic Computer Centre in Gdansk; 2002, 6, 3; 469-482
1428-6394
Pojawia się w:
TASK Quarterly. Scientific Bulletin of Academic Computer Centre in Gdansk
Dostawca treści:
Biblioteka Nauki
Artykuł
    Wyświetlanie 1-2 z 2

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