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Wyszukujesz frazę "chromatin" wg kryterium: Wszystkie pola


Wyświetlanie 1-4 z 4
Tytuł:
DNA microarrays, a novel approach in studies of chromatin structure.
Autorzy:
Widłak, Piotr
Powiązania:
https://bibliotekanauki.pl/articles/1043314.pdf
Data publikacji:
2004
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
chromatin
genomics
epigenomics
DNA microarray
nucleosomes
Opis:
The DNA microarray technology delivers an experimental tool that allows surveying expression of genetic information on a genome-wide scale at the level of single genes - for the new field termed functional genomics. Gene expression profiling - the primary application of DNA microarrays technology - generates monumental amounts of information concerning the functioning of genes, cells and organisms. However, the expression of genetic information is regulated by a number of factors that cannot be directly targeted by standard gene expression profiling. The genetic material of eukaryotic cells is packed into chromatin which provides the compaction and organization of DNA for replication, repair and recombination processes, and is the major epigenetic factor determining the expression of genetic information. Genomic DNA can be methylated and this modification modulates interactions with proteins which change the functional status of genes. Both chromatin structure and transcriptional activity are affected by the processes of replication, recombination and repair. Modified DNA microarray technology could be applied to genome-wide study of epigenetic factors and processes that modulate the expression of genetic information. Attempts to use DNA microarrays in studies of chromatin packing state, chromatin/DNA-binding protein distribution and DNA methylation pattern on a genome-wide scale are briefly reviewed in this paper.
Źródło:
Acta Biochimica Polonica; 2004, 51, 1; 1-8
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
Struktura chromatyny a powstawanie i naprawa uszkodzeń DNA
Chromatin structure and DNA repair
Autorzy:
Widłak, Piotr
Powiązania:
https://bibliotekanauki.pl/articles/1201914.pdf
Data publikacji:
2002
Wydawca:
Polskie Towarzystwo Przyrodników im. Kopernika
Opis:
Chromatin structure modulates the rate of DNA damage formation and repair in different regions of eukaryotic genomes. Chromatin rearrangement takes place during repair to increase accessibility of damage to repair proteins. Activity of histone acetyltransferases and chromatin remodeling complexes seems to be essential for nucleosome rearrangement during repair. Once repair is completed, reconstitution of nucleosomes is required to recover primary chromatin structure. Such chromatin assembly is coupled to repair DNA synthesis. DNA damages induce some modifications to chromatin structure (e.g. phosphorylation of a histone H2A variant in response to DNA double-strand breaks). Such chromatin modifications may serve as signals recognized by DNA repair systems.
Źródło:
Kosmos; 2002, 51, 1; 5-12
0023-4249
Pojawia się w:
Kosmos
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
High mobility group proteins stimulate DNA cleavage by apoptotic endonuclease DFF40/CAD due to HMG-box interactions with DNA
Autorzy:
Kalinowska-Herok, Magdalena
Widłak, Piotr
Powiązania:
https://bibliotekanauki.pl/articles/1040769.pdf
Data publikacji:
2008
Wydawca:
Polskie Towarzystwo Biochemiczne
Tematy:
CAD
cisplatin
HMGB1 protein
chromatin
nuclease
HMG-box
DFF
Opis:
The DFF40/CAD endonuclease is primarily responsible for internucleosomal DNA cleavage during the terminal stages of apoptosis. It has been previously demonstrated that the major HMG-box-containing chromatin proteins HMGB1 and HMGB2 stimulate naked DNA cleavage by DFF40/CAD. Here we investigate the mechanism of this stimulation and show that HMGB1 neither binds to DFF40/CAD nor enhances its ability for stable binding to DNA. Comparison of the stimulatory activities of different truncated forms of HMGB1 protein indicates that a structural array of two HMG-boxes is required for such stimulation. HMG-boxes are known to confer specific local distortions of DNA structure upon binding. Interestingly, the presence of DNA strand cross-links formed by cisplatin or transplatin, which may somehow mimic distortions induced by HMG-boxes, also affects DNA cleavage by the nuclease. The data presented suggest that changes induced in DNA conformation upon HMG-box binding makes the substrate more accessible to cleavage by DFF40/CAD nuclease and thus may contribute to preferential linker DNA cleavage during apoptosis.
Źródło:
Acta Biochimica Polonica; 2008, 55, 1; 21-26
0001-527X
Pojawia się w:
Acta Biochimica Polonica
Dostawca treści:
Biblioteka Nauki
Artykuł
    Wyświetlanie 1-4 z 4

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