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Wyszukujesz frazę "structure optimization" wg kryterium: Temat


Wyświetlanie 1-2 z 2
Tytuł:
Evolutionary algorithm for learning Bayesian structures from data
Autorzy:
Kozłowski, M.
Wierzchoń, S. T.
Powiązania:
https://bibliotekanauki.pl/articles/1986916.pdf
Data publikacji:
2002
Wydawca:
Politechnika Gdańska
Tematy:
Bayesian networks
structure learning
evolutionary algorithm
discrete optimization
Opis:
In this paper we report an evolutionary approach to learning Bayesian networks from data. We explain reasons, which advocate such a non-deterministic approach. We analyze weaknesses of previous works and come to conclusion that we should operate in the search space native for the problem i.e. in the space of directed acyclic graphs instead of standard space of binary strings. This requires adaptation of evolutionary methodology into very specific needs. We propose quite new data representation and implementation of generalized genetic operators and then we present an efficient algorithm capable of learning complex networks without additional assumptions. We discuss results obtained with this algorithm. The approach presented in this paper can be extended with the possibility to absorb some suggestions from experts or obtained by means of data preprocessing.
Źródło:
TASK Quarterly. Scientific Bulletin of Academic Computer Centre in Gdansk; 2002, 6, 3; 509-521
1428-6394
Pojawia się w:
TASK Quarterly. Scientific Bulletin of Academic Computer Centre in Gdansk
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
An example of template based protein structure modeling by global optimization
Autorzy:
Joo, K.
Joung, I.
Lee, J.
Powiązania:
https://bibliotekanauki.pl/articles/1938628.pdf
Data publikacji:
2016
Wydawca:
Politechnika Gdańska
Tematy:
template based modeling
protein structure modeling
global optimization
casp
homology modeling
sequence alignment
fold recognition
Opis:
CASP (Critical Assessment of protein Structure Prediction) is a community-wide experiment for protein structure prediction taking place every two years since 1994. In CASP 11 held in 2014, according to the official CASP 11 assessment, our method named `nns' was ranked as the second best server method based on models ranked as first out of 81 targets. In `nns', we applied the powerful global optimization method of conformational space annealing to three stages of optimization, including multiple sequence-structure alignment, three-dimensional (3D) chain building, and side-chain remodeling. For the fold recognition, a new alignment method called CRF align was used. The good performance of the nns server method is attributed to the successful fold recognition carried out by combined methods including CRF align, and the current modeling formulation incorporating accurate structural aspects collected from multiple templates. In this article, we provide a successful example of `nns' predictions for T0776, for which all details of intermediate modeling data are provided.
Źródło:
TASK Quarterly. Scientific Bulletin of Academic Computer Centre in Gdansk; 2016, 20, 4; 341-352
1428-6394
Pojawia się w:
TASK Quarterly. Scientific Bulletin of Academic Computer Centre in Gdansk
Dostawca treści:
Biblioteka Nauki
Artykuł
    Wyświetlanie 1-2 z 2

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