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Wyświetlanie 1-2 z 2
Tytuł:
Bacilli bacterial cell image analysis using active contour segmentation with SVM classifier
Autorzy:
Bannigidad, Parashuram
Powiązania:
https://bibliotekanauki.pl/articles/1062913.pdf
Data publikacji:
2019
Wydawca:
Przedsiębiorstwo Wydawnictw Naukowych Darwin / Scientific Publishing House DARWIN
Tematy:
Active contour method
Bacillus
Bacillus subtilis
Bacterial cell image analysis
Cell classification
Cocobacilli
Diplobacilli
Palisades
SVM
Segmentation
Streptobacilli
Opis:
The main aim of the present study is to develop an automatic method to identify and classify the different cell types of bacilli bacterial cells in digital microscopic cell images using active contour method. Snakes, or active contours, are used widely in computer vision and machine learning applications, particularly to locate object boundaries. GLCM, HOG and LBP features are used to identify the arrangement of bacilli bacterial cells, namely, bacillus, cocobacilli, diplobacilli, palisades and streptobacilli using SVM classifier. The current methods rely on the subjective reading of profiles by a human expert based on the various manual staining methods. In this paper, it is proposed a method for bacilli bacterial cell classification by segmenting digital bacterial cell images using active contour model and extracting GLCM, HOG and LBP features. The experimental results proves that, the SVM classifier has yielded an overall accuracy of 97.2% with GLCM features, HOG features has yielded an accuracy of 74.8% and LBP features yielded 91.2% accuracy. The GLCM features with SVM classifier has got good classification results compared to HOG and LBP feature sets for bacilli bacteria cell types.
Źródło:
World Scientific News; 2019, 127, 3; 369-376
2392-2192
Pojawia się w:
World Scientific News
Dostawca treści:
Biblioteka Nauki
Artykuł
Tytuł:
CellProfiler and WEKA Tools: Image Analysis for Fish Erythrocytes Shape and Machine Learning Model Algorithm Accuracy Prediction of Dataset
Autorzy:
Talapatra, Soumendra Nath
Chaudhuri, Rupa
Ghosh, Subhasis
Powiązania:
https://bibliotekanauki.pl/articles/1193348.pdf
Data publikacji:
2021
Wydawca:
Przedsiębiorstwo Wydawnictw Naukowych Darwin / Scientific Publishing House DARWIN
Tematy:
Automatic image analysis
CellProfiler tool
Fish erythrocytes quantification
Machine learning algorithm
Model classifier accuracy
Shapes measurement
WEKA tool
Opis:
The first part of the study was detected the number of cells and measurement of shape of cells, cytoplasm, and nuclei in an image of Giemsa-stained of fish peripheral erythrocytes by using CellProfiler (CP, version 2.1.0) tool, an image analysis tool. In the second part, it was evaluated machine learning (ML) algorithm models viz. BayesNet (BN), NaiveBayes (NB), logistic regression (LR), Lazy.KStar (K*), decision tree (DT) J48, Random forest (RF) and Random tree (RT) in the WEKA tool (version 3.8.5) for the prediction of the accuracy of the dataset generated from an image. The CP predicts the numbers and individual cellular area shape (arbitrary unit) of cells, cytoplasm, and nuclei as primary, secondary, and tertiary object data in an image. The performance of model accuracy of studied ML algorithm classifications as per correctly and incorrectly classified instances, the highest values were observed in RF and RT followed by K*, LR, BN and DTJ48 and lowest in NB as per training and testing set of correctly classified instances. In case of performance accuracy of class for K value, the highest values were observed in RF and RT followed by K*, LR, BN and DTJ48 and lowest in NB while lowest values were obtained for mean absolute error (MAE) and root mean squared error (RMSE) in case of RT followed by RF, K*, LR, BN and DTJ48 and comparatively highest value in case of NB as per training and testing set. In conclusion, both tools performed well as an image to the dataset and obtained dataset to rich information through ML modelling and future study in WEKA tool can easily be analysed many biological big data to predict classifier accuracy.
Źródło:
World Scientific News; 2021, 154; 101-116
2392-2192
Pojawia się w:
World Scientific News
Dostawca treści:
Biblioteka Nauki
Artykuł
    Wyświetlanie 1-2 z 2

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