This is the second in a series of articles, the aim of which is to derive mathematical
expressions describing the vertical distributions of the concentrations
of different groups of phytoplankton pigments; these expressions are necessary
in the algorithms for the remote sensing of the marine ecosystem. It presents formulas for the vertical profiles of the following groups of accessory phytoplankton
pigments: chlorophylls b, chlorophylls c, phycobilins, photosynthetic carotenoids
and photoprotecting carotenoids, all for the uppermost layer of water in the Baltic
Sea with an optical depth of τ ≈ 5. The mathematical expressions for the first
four of these five groups of pigments, classified as photosynthetic pigments, enable
their concentrations to be estimated at different optical depths in the sea from
known surface concentrations of chlorophyll a. The precision of these estimates is
characterised by the following relative statistical errors according to logarithmic
statistics σ−: approximately 44% for chlorophyll b, approx. 39% for chlorophyll c,
approx. 43% for phycobilins and approx. 45% for photosynthetic carotenoids. On
the other hand, the mathematical expressions describing the vertical distributions
of photoprotecting carotenoid concentrations enable these to be estimated at
different depths in the sea also from known surface concentrations of chlorophyll a,
but additionally from known values of the irradiance in the PAR spectral range at
the sea surface, with a statistical error σ− of approximately 42%
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